Model info
| Transcription factor | Bach2 | ||||||||
| Model | BACH2_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dSCYSAGTCAY | ||||||||
| Best auROC (human) | 0.925 | ||||||||
| Best auROC (mouse) | 0.987 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 3 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Jun-related factors {1.1.1} | ||||||||
| TF subfamily | NF-E2-like factors {1.1.1.2} | ||||||||
| MGI | MGI:894679 | ||||||||
| EntrezGene | GeneID:12014 (SSTAR profile) | ||||||||
| UniProt ID | BACH2_MOUSE | ||||||||
| UniProt AC | P97303 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Bach2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 94.0 | 69.0 | 73.0 | 264.0 |
| 02 | 28.0 | 50.0 | 394.0 | 28.0 |
| 03 | 24.0 | 436.0 | 21.0 | 19.0 |
| 04 | 43.0 | 47.0 | 15.0 | 395.0 |
| 05 | 29.0 | 49.0 | 380.0 | 42.0 |
| 06 | 422.0 | 17.0 | 4.0 | 57.0 |
| 07 | 13.0 | 70.0 | 412.0 | 5.0 |
| 08 | 9.0 | 7.0 | 1.0 | 483.0 |
| 09 | 13.0 | 484.0 | 2.0 | 1.0 |
| 10 | 493.0 | 0.0 | 2.0 | 5.0 |
| 11 | 7.0 | 184.0 | 78.0 | 231.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.281 | -0.584 | -0.529 | 0.741 |
| 02 | -1.454 | -0.898 | 1.14 | -1.454 |
| 03 | -1.6 | 1.241 | -1.725 | -1.818 |
| 04 | -1.044 | -0.958 | -2.034 | 1.142 |
| 05 | -1.421 | -0.918 | 1.104 | -1.067 |
| 06 | 1.208 | -1.92 | -3.126 | -0.771 |
| 07 | -2.163 | -0.57 | 1.184 | -2.961 |
| 08 | -2.484 | -2.694 | -3.903 | 1.343 |
| 09 | -2.163 | 1.345 | -3.573 | -3.903 |
| 10 | 1.363 | -4.4 | -3.573 | -2.961 |
| 11 | -2.694 | 0.383 | -0.464 | 0.608 |