We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBATF3
(GeneCards)
ModelBATF3_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
B
Motif rank
0
ConsensusndSTTYChnWhTGAbdn
Best auROC (human)
Best auROC (mouse)0.963
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)5
Aligned words500
TF familyB-ATF-related factors {1.1.4}
TF subfamilyB-ATF-3 {1.1.4.0.3}
HGNCHGNC:28915
EntrezGeneGeneID:55509
(SSTAR profile)
UniProt IDBATF3_HUMAN
UniProt ACQ9NR55
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.387359999999999
0.0005 6.28326
0.0001 8.11431
GTEx tissue expression atlas BATF3 expression
ReMap ChIP-seq dataset list BATF3 datasets
Motifs in JASPAR
PCM
ACGT
0186.0177.0103.0134.0
02242.028.0122.0108.0
0315.0195.0251.039.0
0415.08.07.0470.0
0523.032.04.0441.0
0621.080.021.0378.0
079.0428.010.053.0
08251.089.060.0100.0
09105.091.0109.0195.0
10115.021.032.0332.0
11241.099.028.0132.0
124.00.05.0491.0
136.012.0405.077.0
14432.03.021.044.0
1550.0231.0159.060.0
16126.060.073.0241.0
17121.0193.093.093.0
PWM
ACGT
01-0.3680.344-0.1910.069
020.655-1.454-0.024-0.144
03-2.0340.440.691-1.138
04-2.034-2.584-2.6941.315
05-1.64-1.328-3.1261.252
06-1.725-0.439-1.7251.098
07-2.4841.222-2.394-0.841
080.691-0.335-0.721-0.22
09-0.172-0.313-0.1350.44
10-0.082-1.725-1.3280.969
110.651-0.23-1.4540.054
12-3.126-4.4-2.9611.359
13-2.819-2.2341.167-0.477
141.231-3.325-1.725-1.022
15-0.8980.6080.238-0.721
160.008-0.721-0.5290.651
17-0.0320.43-0.291-0.291