Model info
| Transcription factor | BATF (GeneCards) | ||||||||
| Model | BATF_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 18 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dbTYYYddWWTGASTnWb | ||||||||
| Best auROC (human) | 0.963 | ||||||||
| Best auROC (mouse) | 0.938 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 20 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | B-ATF-related factors {1.1.4} | ||||||||
| TF subfamily | B-ATF {1.1.4.0.1} | ||||||||
| HGNC | HGNC:958 | ||||||||
| EntrezGene | GeneID:10538 (SSTAR profile) | ||||||||
| UniProt ID | BATF_HUMAN | ||||||||
| UniProt AC | Q16520 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BATF expression | ||||||||
| ReMap ChIP-seq dataset list | BATF datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 226.0 | 39.0 | 132.0 | 103.0 |
| 02 | 24.0 | 200.0 | 173.0 | 103.0 |
| 03 | 6.0 | 9.0 | 22.0 | 463.0 |
| 04 | 67.0 | 164.0 | 12.0 | 257.0 |
| 05 | 43.0 | 119.0 | 26.0 | 312.0 |
| 06 | 71.0 | 273.0 | 23.0 | 133.0 |
| 07 | 190.0 | 43.0 | 198.0 | 69.0 |
| 08 | 185.0 | 57.0 | 115.0 | 143.0 |
| 09 | 169.0 | 9.0 | 42.0 | 280.0 |
| 10 | 289.0 | 79.0 | 11.0 | 121.0 |
| 11 | 1.0 | 1.0 | 0.0 | 498.0 |
| 12 | 2.0 | 28.0 | 425.0 | 45.0 |
| 13 | 489.0 | 4.0 | 6.0 | 1.0 |
| 14 | 52.0 | 279.0 | 158.0 | 11.0 |
| 15 | 36.0 | 15.0 | 10.0 | 439.0 |
| 16 | 106.0 | 254.0 | 106.0 | 34.0 |
| 17 | 306.0 | 42.0 | 55.0 | 97.0 |
| 18 | 71.0 | 93.0 | 153.0 | 183.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.587 | -1.138 | 0.054 | -0.191 |
| 02 | -1.6 | 0.465 | 0.322 | -0.191 |
| 03 | -2.819 | -2.484 | -1.681 | 1.3 |
| 04 | -0.613 | 0.269 | -2.234 | 0.714 |
| 05 | -1.044 | -0.049 | -1.525 | 0.907 |
| 06 | -0.556 | 0.774 | -1.64 | 0.061 |
| 07 | 0.415 | -1.044 | 0.455 | -0.584 |
| 08 | 0.388 | -0.771 | -0.082 | 0.133 |
| 09 | 0.298 | -2.484 | -1.067 | 0.8 |
| 10 | 0.831 | -0.452 | -2.311 | -0.032 |
| 11 | -3.903 | -3.903 | -4.4 | 1.373 |
| 12 | -3.573 | -1.454 | 1.215 | -1.0 |
| 13 | 1.355 | -3.126 | -2.819 | -3.903 |
| 14 | -0.86 | 0.796 | 0.232 | -2.311 |
| 15 | -1.215 | -2.034 | -2.394 | 1.247 |
| 16 | -0.163 | 0.703 | -0.163 | -1.27 |
| 17 | 0.888 | -1.067 | -0.805 | -0.25 |
| 18 | -0.556 | -0.291 | 0.2 | 0.377 |