Model info
| Transcription factor | BATF (GeneCards) | ||||||||
| Model | BATF_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | dMTGAYKCAWh | ||||||||
| Best auROC (human) | 0.89 | ||||||||
| Best auROC (mouse) | 0.856 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 20 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | B-ATF-related factors {1.1.4} | ||||||||
| TF subfamily | B-ATF {1.1.4.0.1} | ||||||||
| HGNC | HGNC:958 | ||||||||
| EntrezGene | GeneID:10538 (SSTAR profile) | ||||||||
| UniProt ID | BATF_HUMAN | ||||||||
| UniProt AC | Q16520 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BATF expression | ||||||||
| ReMap ChIP-seq dataset list | BATF datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 162.0 | 34.0 | 196.0 | 108.0 |
| 02 | 287.0 | 109.0 | 96.0 | 8.0 |
| 03 | 7.0 | 2.0 | 2.0 | 489.0 |
| 04 | 0.0 | 6.0 | 467.0 | 27.0 |
| 05 | 484.0 | 5.0 | 4.0 | 7.0 |
| 06 | 5.0 | 257.0 | 27.0 | 211.0 |
| 07 | 14.0 | 14.0 | 216.0 | 256.0 |
| 08 | 47.0 | 438.0 | 7.0 | 8.0 |
| 09 | 488.0 | 9.0 | 0.0 | 3.0 |
| 10 | 305.0 | 28.0 | 72.0 | 95.0 |
| 11 | 119.0 | 142.0 | 50.0 | 189.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.256 | -1.27 | 0.445 | -0.144 |
| 02 | 0.824 | -0.135 | -0.26 | -2.584 |
| 03 | -2.694 | -3.573 | -3.573 | 1.355 |
| 04 | -4.4 | -2.819 | 1.309 | -1.489 |
| 05 | 1.345 | -2.961 | -3.126 | -2.694 |
| 06 | -2.961 | 0.714 | -1.489 | 0.519 |
| 07 | -2.096 | -2.096 | 0.542 | 0.711 |
| 08 | -0.958 | 1.245 | -2.694 | -2.584 |
| 09 | 1.353 | -2.484 | -4.4 | -3.325 |
| 10 | 0.885 | -1.454 | -0.543 | -0.271 |
| 11 | -0.049 | 0.126 | -0.898 | 0.409 |