We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBATF
(GeneCards)
ModelBATF_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
1
ConsensusdMTGAYKCAWh
Best auROC (human)0.89
Best auROC (mouse)0.856
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)20
Aligned words500
TF familyB-ATF-related factors {1.1.4}
TF subfamilyB-ATF {1.1.4.0.1}
HGNCHGNC:958
EntrezGeneGeneID:10538
(SSTAR profile)
UniProt IDBATF_HUMAN
UniProt ACQ16520
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.087395
0.0005 6.005205
0.0001 7.932855
GTEx tissue expression atlas BATF expression
ReMap ChIP-seq dataset list BATF datasets
Motifs in JASPAR
PCM
ACGT
01162.034.0196.0108.0
02287.0109.096.08.0
037.02.02.0489.0
040.06.0467.027.0
05484.05.04.07.0
065.0257.027.0211.0
0714.014.0216.0256.0
0847.0438.07.08.0
09488.09.00.03.0
10305.028.072.095.0
11119.0142.050.0189.0
PWM
ACGT
010.256-1.270.445-0.144
020.824-0.135-0.26-2.584
03-2.694-3.573-3.5731.355
04-4.4-2.8191.309-1.489
051.345-2.961-3.126-2.694
06-2.9610.714-1.4890.519
07-2.096-2.0960.5420.711
08-0.9581.245-2.694-2.584
091.353-2.484-4.4-3.325
100.885-1.454-0.543-0.271
11-0.0490.126-0.8980.409