Model info
| Transcription factor | Batf | ||||||||
| Model | BATF_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 18 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dnKhhhvddWTGASTSWb | ||||||||
| Best auROC (human) | 0.959 | ||||||||
| Best auROC (mouse) | 0.943 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 20 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | B-ATF-related factors {1.1.4} | ||||||||
| TF subfamily | B-ATF {1.1.4.0.1} | ||||||||
| MGI | MGI:1859147 | ||||||||
| EntrezGene | GeneID:53314 (SSTAR profile) | ||||||||
| UniProt ID | BATF_MOUSE | ||||||||
| UniProt AC | O35284 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Batf expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 198.0 | 32.0 | 145.0 | 125.0 |
| 02 | 85.0 | 131.0 | 199.0 | 85.0 |
| 03 | 44.0 | 37.0 | 78.0 | 341.0 |
| 04 | 74.0 | 174.0 | 59.0 | 193.0 |
| 05 | 67.0 | 147.0 | 52.0 | 234.0 |
| 06 | 100.0 | 227.0 | 50.0 | 123.0 |
| 07 | 152.0 | 83.0 | 186.0 | 79.0 |
| 08 | 241.0 | 69.0 | 99.0 | 91.0 |
| 09 | 200.0 | 19.0 | 87.0 | 194.0 |
| 10 | 324.0 | 61.0 | 23.0 | 92.0 |
| 11 | 3.0 | 1.0 | 1.0 | 495.0 |
| 12 | 2.0 | 16.0 | 447.0 | 35.0 |
| 13 | 487.0 | 2.0 | 5.0 | 6.0 |
| 14 | 47.0 | 299.0 | 152.0 | 2.0 |
| 15 | 47.0 | 11.0 | 4.0 | 438.0 |
| 16 | 69.0 | 267.0 | 147.0 | 17.0 |
| 17 | 311.0 | 22.0 | 51.0 | 116.0 |
| 18 | 65.0 | 102.0 | 206.0 | 127.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.455 | -1.328 | 0.147 | 0.0 |
| 02 | -0.38 | 0.046 | 0.46 | -0.38 |
| 03 | -1.022 | -1.189 | -0.464 | 0.996 |
| 04 | -0.516 | 0.327 | -0.737 | 0.43 |
| 05 | -0.613 | 0.16 | -0.86 | 0.621 |
| 06 | -0.22 | 0.591 | -0.898 | -0.016 |
| 07 | 0.193 | -0.403 | 0.393 | -0.452 |
| 08 | 0.651 | -0.584 | -0.23 | -0.313 |
| 09 | 0.465 | -1.818 | -0.357 | 0.435 |
| 10 | 0.945 | -0.705 | -1.64 | -0.302 |
| 11 | -3.325 | -3.903 | -3.903 | 1.367 |
| 12 | -3.573 | -1.975 | 1.265 | -1.242 |
| 13 | 1.351 | -3.573 | -2.961 | -2.819 |
| 14 | -0.958 | 0.865 | 0.193 | -3.573 |
| 15 | -0.958 | -2.311 | -3.126 | 1.245 |
| 16 | -0.584 | 0.752 | 0.16 | -1.92 |
| 17 | 0.904 | -1.681 | -0.879 | -0.074 |
| 18 | -0.643 | -0.201 | 0.495 | 0.016 |