Model info
| Transcription factor | BCL11A (GeneCards) | ||||||||
| Model | BC11A_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdvRvRGGAAvYRRvRv | ||||||||
| Best auROC (human) | 0.9 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | BCL11 {2.3.4.15} | ||||||||
| HGNC | HGNC:13221 | ||||||||
| EntrezGene | GeneID:53335 (SSTAR profile) | ||||||||
| UniProt ID | BC11A_HUMAN | ||||||||
| UniProt AC | Q9H165 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BCL11A expression | ||||||||
| ReMap ChIP-seq dataset list | BCL11A datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 187.878 | 92.306 | 143.101 | 76.716 |
| 02 | 275.32 | 49.72 | 112.044 | 62.915 |
| 03 | 250.107 | 71.171 | 115.355 | 63.367 |
| 04 | 295.025 | 8.285 | 113.023 | 83.667 |
| 05 | 93.711 | 80.389 | 290.241 | 35.658 |
| 06 | 332.297 | 7.267 | 134.69 | 25.746 |
| 07 | 52.004 | 7.221 | 414.333 | 26.442 |
| 08 | 100.204 | 16.364 | 379.324 | 4.108 |
| 09 | 440.112 | 21.542 | 24.279 | 14.068 |
| 10 | 433.994 | 2.895 | 27.753 | 35.358 |
| 11 | 124.199 | 113.021 | 251.096 | 11.684 |
| 12 | 75.069 | 77.487 | 15.757 | 331.687 |
| 13 | 58.903 | 36.228 | 380.145 | 24.723 |
| 14 | 329.415 | 32.188 | 125.332 | 13.065 |
| 15 | 229.413 | 71.716 | 155.089 | 43.782 |
| 16 | 311.388 | 39.405 | 78.638 | 70.569 |
| 17 | 179.504 | 102.346 | 159.045 | 59.106 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.403 | -0.299 | 0.134 | -0.481 |
| 02 | 0.783 | -0.903 | -0.108 | -0.674 |
| 03 | 0.687 | -0.554 | -0.079 | -0.668 |
| 04 | 0.852 | -2.554 | -0.099 | -0.395 |
| 05 | -0.284 | -0.435 | 0.835 | -1.224 |
| 06 | 0.97 | -2.664 | 0.074 | -1.534 |
| 07 | -0.86 | -2.669 | 1.19 | -1.509 |
| 08 | -0.218 | -1.955 | 1.102 | -3.107 |
| 09 | 1.25 | -1.701 | -1.589 | -2.092 |
| 10 | 1.236 | -3.348 | -1.463 | -1.232 |
| 11 | -0.006 | -0.099 | 0.691 | -2.258 |
| 12 | -0.502 | -0.471 | -1.989 | 0.968 |
| 13 | -0.739 | -1.209 | 1.104 | -1.572 |
| 14 | 0.961 | -1.322 | 0.003 | -2.158 |
| 15 | 0.602 | -0.547 | 0.213 | -1.027 |
| 16 | 0.905 | -1.128 | -0.456 | -0.562 |
| 17 | 0.358 | -0.197 | 0.238 | -0.735 |