We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBCL11A
(GeneCards)
ModelBC11A_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length17
Quality
A
Motif rank
0
ConsensusvdvRvRGGAAvYRRvRv
Best auROC (human)0.9
Best auROC (mouse)
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)
Aligned words500
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyBCL11 {2.3.4.15}
HGNCHGNC:13221
EntrezGeneGeneID:53335
(SSTAR profile)
UniProt IDBC11A_HUMAN
UniProt ACQ9H165
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.72026
0.0005 6.528309999999999
0.0001 8.20076
GTEx tissue expression atlas BCL11A expression
ReMap ChIP-seq dataset list BCL11A datasets
Motifs in JASPAR
PCM
ACGT
01187.87892.306143.10176.716
02275.3249.72112.04462.915
03250.10771.171115.35563.367
04295.0258.285113.02383.667
0593.71180.389290.24135.658
06332.2977.267134.6925.746
0752.0047.221414.33326.442
08100.20416.364379.3244.108
09440.11221.54224.27914.068
10433.9942.89527.75335.358
11124.199113.021251.09611.684
1275.06977.48715.757331.687
1358.90336.228380.14524.723
14329.41532.188125.33213.065
15229.41371.716155.08943.782
16311.38839.40578.63870.569
17179.504102.346159.04559.106
PWM
ACGT
010.403-0.2990.134-0.481
020.783-0.903-0.108-0.674
030.687-0.554-0.079-0.668
040.852-2.554-0.099-0.395
05-0.284-0.4350.835-1.224
060.97-2.6640.074-1.534
07-0.86-2.6691.19-1.509
08-0.218-1.9551.102-3.107
091.25-1.701-1.589-2.092
101.236-3.348-1.463-1.232
11-0.006-0.0990.691-2.258
12-0.502-0.471-1.9890.968
13-0.739-1.2091.104-1.572
140.961-1.3220.003-2.158
150.602-0.5470.213-1.027
160.905-1.128-0.456-0.562
170.358-0.1970.238-0.735