We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBCL6B
(GeneCards)
ModelBCL6B_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnYGCTTTCTAG
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words66
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyBCL6 factors {2.3.3.22}
HGNCHGNC:1002
EntrezGeneGeneID:255877
(SSTAR profile)
UniProt IDBCL6B_HUMAN
UniProt ACQ8N143
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.639105
0.0005 4.514785
0.0001 6.79574
GTEx tissue expression atlas BCL6B expression
ReMap ChIP-seq dataset list BCL6B datasets
Motifs in JASPAR
PCM
ACGT
0123.018.011.014.0
023.024.01.038.0
034.00.061.01.0
040.064.00.02.0
059.00.00.057.0
060.01.00.065.0
070.00.00.066.0
080.066.00.00.0
090.00.029.037.0
1064.250.251.250.25
110.250.2565.250.25
PWM
ACGT
010.3150.082-0.376-0.154
02-1.4670.356-2.1480.8
03-1.246-2.8191.263-2.148
04-2.8191.31-2.819-1.751
05-0.558-2.819-2.8191.196
06-2.819-2.148-2.8191.325
07-2.819-2.819-2.8191.34
08-2.8191.34-2.819-2.819
09-2.819-2.8190.5380.774
101.314-2.605-2.033-2.605
11-2.605-2.6051.329-2.605