We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBCL6
(GeneCards)
ModelBCL6_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnvnhdhbAGGAAvhdn
Best auROC (human)0.913
Best auROC (mouse)0.948
Peak sets in benchmark (human)27
Peak sets in benchmark (mouse)11
Aligned words502
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyBCL6 factors {2.3.3.22}
HGNCHGNC:1001
EntrezGeneGeneID:604
(SSTAR profile)
UniProt IDBCL6_HUMAN
UniProt ACP41182
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.23996
0.0005 13.03171
0.0001 16.05101
GTEx tissue expression atlas BCL6 expression
ReMap ChIP-seq dataset list BCL6 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0145.024.035.012.063.026.07.011.045.076.019.022.054.037.08.016.0
0268.035.068.036.042.027.04.090.031.020.010.08.018.014.016.013.0
0399.018.020.022.030.023.04.039.060.021.013.04.025.024.026.072.0
04132.019.043.020.022.013.06.045.024.010.012.017.014.012.017.094.0
05133.014.014.031.033.07.01.013.029.05.034.010.023.0116.09.028.0
0628.060.0116.014.012.036.027.067.019.016.022.01.06.024.049.03.0
0755.06.04.00.0131.01.01.03.0170.08.034.02.076.01.08.00.0
089.02.0421.00.03.00.012.01.00.00.046.01.00.00.05.00.0
090.00.012.00.00.01.01.00.03.010.0471.00.00.00.02.00.0
103.00.00.00.011.00.00.00.0469.05.05.07.00.00.00.00.0
11455.01.07.020.05.00.00.00.05.00.00.00.06.00.01.00.0
12149.075.0209.038.00.00.01.00.02.04.02.00.04.02.014.00.0
1327.033.027.068.025.013.03.040.029.029.031.0137.09.08.07.014.0
1425.016.036.013.030.011.014.028.020.08.034.06.043.027.0131.058.0
1546.028.028.016.023.017.05.017.085.032.061.037.026.026.039.014.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.361-0.260.112-0.9380.695-0.181-1.454-1.0220.3610.881-0.49-0.3460.5420.167-1.328-0.658
020.7710.1120.7710.140.293-0.144-1.9751.05-0.008-0.439-1.114-1.328-0.543-0.788-0.658-0.86
031.145-0.543-0.439-0.346-0.04-0.302-1.9750.2190.646-0.392-0.86-1.975-0.22-0.26-0.1810.828
041.431-0.490.316-0.439-0.346-0.86-1.60.361-0.26-1.114-0.938-0.599-0.788-0.938-0.5991.093
051.439-0.788-0.788-0.0080.054-1.454-3.126-0.86-0.074-1.770.083-1.114-0.3021.303-1.215-0.108
06-0.1080.6461.303-0.788-0.9380.14-0.1440.756-0.49-0.658-0.346-3.126-1.6-0.260.445-2.234
070.56-1.6-1.975-4.41.424-3.126-3.126-2.2341.684-1.3280.083-2.5840.881-3.126-1.328-4.4
08-1.215-2.5842.589-4.4-2.234-4.4-0.938-3.126-4.4-4.40.383-3.126-4.4-4.4-1.77-4.4
09-4.4-4.4-0.938-4.4-4.4-3.126-3.126-4.4-2.234-1.1142.701-4.4-4.4-4.4-2.584-4.4
10-2.234-4.4-4.4-4.4-1.022-4.4-4.4-4.42.697-1.77-1.77-1.454-4.4-4.4-4.4-4.4
112.667-3.126-1.454-0.439-1.77-4.4-4.4-4.4-1.77-4.4-4.4-4.4-1.6-4.4-3.126-4.4
121.5520.8681.890.193-4.4-4.4-3.126-4.4-2.584-1.975-2.584-4.4-1.975-2.584-0.788-4.4
13-0.1440.054-0.1440.771-0.22-0.86-2.2340.244-0.074-0.074-0.0081.468-1.215-1.328-1.454-0.788
14-0.22-0.6580.14-0.86-0.04-1.022-0.788-0.108-0.439-1.3280.083-1.60.316-0.1441.4240.613
150.383-0.108-0.108-0.658-0.302-0.599-1.77-0.5990.9930.0230.6630.167-0.181-0.1810.219-0.788