We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBCL6
(GeneCards)
ModelBCL6_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusbdMYYTCYAGGAA
Best auROC (human)0.802
Best auROC (mouse)0.874
Peak sets in benchmark (human)27
Peak sets in benchmark (mouse)11
Aligned words500
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyBCL6 factors {2.3.3.22}
HGNCHGNC:1001
EntrezGeneGeneID:604
(SSTAR profile)
UniProt IDBCL6_HUMAN
UniProt ACP41182
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.35816
0.0005 6.239965
0.0001 8.04784
GTEx tissue expression atlas BCL6 expression
ReMap ChIP-seq dataset list BCL6 datasets
Motifs in JASPAR
MA0463.1 (Bcl6; Mus musculus)
PCM
ACGT
0180.0128.095.0197.0
0286.063.0207.0144.0
0372.0319.069.040.0
0447.0112.08.0333.0
0519.095.056.0330.0
068.021.013.0458.0
073.0415.010.072.0
0812.0217.047.0224.0
09485.07.08.00.0
1086.01.0386.027.0
1113.035.0420.032.0
12418.022.042.018.0
13410.027.037.026.0
PWM
ACGT
01-0.4390.023-0.2710.45
02-0.368-0.6730.50.14
03-0.5430.929-0.584-1.114
04-0.958-0.108-2.5840.972
05-1.818-0.271-0.7880.963
06-2.584-1.725-2.1631.29
07-3.3251.191-2.394-0.543
08-2.2340.546-0.9580.578
091.347-2.694-2.584-4.4
10-0.368-3.9031.119-1.489
11-2.163-1.2421.203-1.328
121.199-1.681-1.067-1.868
131.179-1.489-1.189-1.525