Model info
| Transcription factor | Bcl6 | ||||||||
| Model | BCL6_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hnMWYTCYAGGRW | ||||||||
| Best auROC (human) | 0.797 | ||||||||
| Best auROC (mouse) | 0.885 | ||||||||
| Peak sets in benchmark (human) | 27 | ||||||||
| Peak sets in benchmark (mouse) | 11 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | BCL6 factors {2.3.3.22} | ||||||||
| MGI | MGI:107187 | ||||||||
| EntrezGene | GeneID:12053 (SSTAR profile) | ||||||||
| UniProt ID | BCL6_MOUSE | ||||||||
| UniProt AC | P41183 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Bcl6 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 90.0 | 108.0 | 89.0 | 213.0 |
| 02 | 104.0 | 72.0 | 220.0 | 104.0 |
| 03 | 91.0 | 313.0 | 43.0 | 53.0 |
| 04 | 72.0 | 63.0 | 27.0 | 338.0 |
| 05 | 24.0 | 158.0 | 34.0 | 284.0 |
| 06 | 20.0 | 22.0 | 6.0 | 452.0 |
| 07 | 2.0 | 438.0 | 4.0 | 56.0 |
| 08 | 19.0 | 262.0 | 23.0 | 196.0 |
| 09 | 478.0 | 10.0 | 8.0 | 4.0 |
| 10 | 65.0 | 2.0 | 406.0 | 27.0 |
| 11 | 14.0 | 33.0 | 419.0 | 34.0 |
| 12 | 336.0 | 48.0 | 68.0 | 48.0 |
| 13 | 388.0 | 36.0 | 13.0 | 63.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.324 | -0.144 | -0.335 | 0.528 |
| 02 | -0.181 | -0.543 | 0.56 | -0.181 |
| 03 | -0.313 | 0.91 | -1.044 | -0.841 |
| 04 | -0.543 | -0.673 | -1.489 | 0.987 |
| 05 | -1.6 | 0.232 | -1.27 | 0.814 |
| 06 | -1.77 | -1.681 | -2.819 | 1.276 |
| 07 | -3.573 | 1.245 | -3.126 | -0.788 |
| 08 | -1.818 | 0.734 | -1.64 | 0.445 |
| 09 | 1.332 | -2.394 | -2.584 | -3.126 |
| 10 | -0.643 | -3.573 | 1.17 | -1.489 |
| 11 | -2.096 | -1.298 | 1.201 | -1.27 |
| 12 | 0.981 | -0.938 | -0.599 | -0.938 |
| 13 | 1.124 | -1.215 | -2.163 | -0.673 |