We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBHLHE22
(GeneCards)
ModelBHE22_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusdvCATATGTTYhh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2250
TF familyTal-related factors {1.2.3}
TF subfamilyNeurogenin / Atonal-like factors {1.2.3.4}
HGNCHGNC:11963
EntrezGeneGeneID:27319
(SSTAR profile)
UniProt IDBHE22_HUMAN
UniProt ACQ8NFJ8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.645765
0.0005 2.5764050000000003
0.0001 5.64242
GTEx tissue expression atlas BHLHE22 expression
ReMap ChIP-seq dataset list BHLHE22 datasets
Motifs in JASPAR
PCM
ACGT
011322.5240.5439.5243.5
02691.5857.5477.5219.5
030.02246.00.00.0
042244.00.02.00.0
050.00.00.02246.0
062246.00.00.00.0
070.00.00.02246.0
080.00.02246.00.0
090.0116.0417.01713.0
1013.526.513.52192.5
11240.75255.75133.751615.75
12424.0425.0234.01163.0
13417.75357.75325.751144.75
PWM
ACGT
010.855-0.843-0.244-0.831
020.2080.422-0.161-0.934
03-5.6771.384-5.677-5.677
041.383-5.677-4.966-5.677
05-5.677-5.677-5.6771.384
061.384-5.677-5.677-5.677
07-5.677-5.677-5.6771.384
08-5.677-5.6771.384-5.677
09-5.677-1.564-0.2961.113
10-3.598-2.987-3.5981.36
11-0.842-0.782-1.4241.055
12-0.28-0.277-0.8710.726
13-0.295-0.449-0.5420.711