We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBHLHE40
(GeneCards)
ModelBHE40_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdKCACGTGMv
Best auROC (human)0.855
Best auROC (mouse)0.953
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)5
Aligned words508
TF familyHairy-related factors {1.2.4}
TF subfamilyHairy-like factors {1.2.4.1}
HGNCHGNC:1046
EntrezGeneGeneID:8553
(SSTAR profile)
UniProt IDBHE40_HUMAN
UniProt ACO14503
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.5601650000000005
0.0005 4.4435649999999995
0.0001 6.05724
GTEx tissue expression atlas BHLHE40 expression
ReMap ChIP-seq dataset list BHLHE40 datasets
Motifs in JASPAR
PCM
ACGT
01173.042.0185.0100.0
0285.07.0314.094.0
0349.0449.01.01.0
04472.06.08.014.0
054.0465.08.023.0
0626.021.0450.03.0
0723.07.023.0447.0
081.00.0499.00.0
09292.0117.058.033.0
1046.0229.0190.035.0
PWM
ACGT
010.322-1.0670.388-0.22
02-0.38-2.6940.914-0.281
03-0.9181.27-3.903-3.903
041.32-2.819-2.584-2.096
05-3.1261.305-2.584-1.64
06-1.525-1.7251.272-3.325
07-1.64-2.694-1.641.265
08-3.903-4.41.375-4.4
090.841-0.065-0.754-1.298
10-0.9790.60.415-1.242