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Model info
Transcription factorARNTL
(GeneCards)
ModelBMAL1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusbnbvnnnvdvCACGTGMb
Best auROC (human)0.881
Best auROC (mouse)0.868
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words503
TF familyPAS domain factors {1.2.5}
TF subfamilyArnt-like factors {1.2.5.2}
HGNCHGNC:701
EntrezGeneGeneID:406
(SSTAR profile)
UniProt IDBMAL1_HUMAN
UniProt ACO00327
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.58436
0.0005 8.29591
0.0001 11.88186
GTEx tissue expression atlas ARNTL expression
ReMap ChIP-seq dataset list ARNTL datasets
Motifs in JASPAR
MA0603.1 (Arntl; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.010.09.026.065.057.055.027.025.048.018.051.013.012.046.019.0
0220.019.030.048.021.024.040.042.019.032.026.051.018.07.067.031.0
0332.014.028.04.015.030.025.012.027.057.064.015.08.041.0103.020.0
0414.035.020.013.027.064.017.034.043.076.034.067.02.021.015.013.0
0520.022.029.015.048.068.039.041.019.042.011.014.023.027.065.012.0
0619.025.050.016.043.042.031.043.027.039.053.025.08.035.029.010.0
0719.014.040.024.057.024.040.020.038.035.063.027.012.018.050.014.0
0829.021.058.018.031.012.030.018.051.028.086.028.011.09.041.024.0
0951.033.031.07.025.035.010.00.047.0114.038.016.023.031.030.04.0
1010.0134.02.00.09.0196.05.03.08.097.02.02.01.026.00.00.0
1120.00.07.01.0422.06.018.07.08.00.01.00.03.02.00.00.0
127.0365.04.077.03.02.00.03.03.019.00.04.00.07.00.01.0
130.00.013.00.06.06.0379.02.00.00.04.00.03.02.075.05.0
140.00.00.09.00.01.00.07.07.02.01.0461.00.00.00.07.0
150.00.06.01.00.00.03.00.00.00.01.00.08.01.0464.011.0
162.01.05.00.00.01.00.00.0328.065.039.042.07.00.02.03.0
1728.0149.0118.042.024.014.015.014.05.07.022.012.07.010.013.015.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.778-1.104-1.205-0.1720.7360.6050.57-0.134-0.210.435-0.5330.495-0.85-0.9280.393-0.48
02-0.429-0.48-0.030.435-0.382-0.250.2540.302-0.480.033-0.1720.495-0.533-1.4450.7660.002
030.033-0.778-0.098-1.966-0.711-0.03-0.21-0.928-0.1340.6050.72-0.711-1.3180.2791.194-0.429
04-0.7780.122-0.429-0.85-0.1340.72-0.5890.0930.3260.8910.0930.766-2.574-0.382-0.711-0.85
05-0.429-0.336-0.064-0.7110.4350.7810.2290.279-0.480.302-1.012-0.778-0.292-0.1340.736-0.928
06-0.48-0.210.475-0.6480.3260.3020.0020.326-0.1340.2290.533-0.21-1.3180.122-0.064-1.104
07-0.48-0.7780.254-0.250.605-0.250.254-0.4290.2030.1220.705-0.134-0.928-0.5330.475-0.778
08-0.064-0.3820.623-0.5330.002-0.928-0.03-0.5330.495-0.0981.014-0.098-1.012-1.2050.279-0.25
090.4950.0640.002-1.445-0.210.122-1.104-4.3920.4141.2950.203-0.648-0.2920.002-0.03-1.966
10-1.1041.456-2.574-4.392-1.2051.836-1.76-2.224-1.3181.134-2.574-2.574-3.117-0.172-4.392-4.392
11-0.429-4.392-1.445-3.1172.601-1.59-0.533-1.445-1.318-4.392-3.117-4.392-2.224-2.574-4.392-4.392
12-1.4452.457-1.9660.904-2.224-2.574-4.392-2.224-2.224-0.48-4.392-1.966-4.392-1.445-4.392-3.117
13-4.392-4.392-0.85-4.392-1.59-1.592.494-2.574-4.392-4.392-1.966-4.392-2.224-2.5740.878-1.76
14-4.392-4.392-4.392-1.205-4.392-3.117-4.392-1.445-1.445-2.574-3.1172.69-4.392-4.392-4.392-1.445
15-4.392-4.392-1.59-3.117-4.392-4.392-2.224-4.392-4.392-4.392-3.117-4.392-1.318-3.1172.696-1.012
16-2.574-3.117-1.76-4.392-4.392-3.117-4.392-4.3922.350.7360.2290.302-1.445-4.392-2.574-2.224
17-0.0981.5621.330.302-0.25-0.778-0.711-0.778-1.76-1.445-0.336-0.928-1.445-1.104-0.85-0.711