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Model info
Transcription factorArntl
ModelBMAL1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnnbbvbnnSCAYGTGhbn
Best auROC (human)0.859
Best auROC (mouse)0.883
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words420
TF familyPAS domain factors {1.2.5}
TF subfamilyArnt-like factors {1.2.5.2}
MGIMGI:1096381
EntrezGeneGeneID:11865
(SSTAR profile)
UniProt IDBMAL1_MOUSE
UniProt ACQ9WTL8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.689260000000001
0.0005 8.55016
0.0001 12.50076
GTEx tissue expression atlas Arntl expression
Motifs in JASPAR
MA0603.1 (Arntl; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
018.013.018.031.033.024.038.035.019.034.012.059.08.011.051.016.0
029.015.033.011.016.022.017.027.09.041.048.021.08.029.091.013.0
034.010.021.07.022.047.014.024.019.061.058.051.05.024.033.010.0
042.019.022.07.032.058.032.020.018.044.048.016.010.023.052.07.0
0511.026.016.09.023.058.020.043.023.064.026.041.03.015.013.019.0
0610.06.042.02.052.030.035.046.010.023.026.016.015.015.052.030.0
0721.016.028.022.025.013.014.022.016.045.046.048.019.011.045.019.0
0820.024.036.01.030.039.015.01.032.073.027.01.014.060.037.00.0
096.089.01.00.09.0186.00.01.04.0107.02.02.00.01.00.02.0
1019.00.00.00.0350.03.018.012.02.01.00.00.04.00.01.00.0
117.0261.023.084.00.04.00.00.00.017.00.02.00.09.00.03.0
120.01.06.00.01.02.0285.03.01.00.022.00.01.01.084.03.0
130.00.00.03.00.00.00.04.03.00.03.0391.00.00.00.06.0
140.00.03.00.00.00.00.00.00.00.03.00.00.00.0391.013.0
150.00.00.00.00.00.00.00.0165.0151.07.074.00.07.00.06.0
1612.095.041.017.026.061.030.041.03.03.00.01.05.031.036.08.0
179.017.011.09.039.059.017.075.016.024.024.043.013.018.026.010.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.133-0.665-0.3470.1880.25-0.0650.3890.308-0.2940.279-0.7420.826-1.133-0.8270.681-0.462
02-1.02-0.5250.25-0.827-0.462-0.15-0.4030.052-1.020.4650.621-0.196-1.1330.1221.257-0.665
03-1.782-0.919-0.196-1.26-0.150.6-0.593-0.065-0.2940.8590.8090.681-1.576-0.0650.25-0.919
04-2.393-0.294-0.15-1.260.2190.8090.219-0.244-0.3470.5350.621-0.462-0.919-0.1060.7-1.26
05-0.8270.014-0.462-1.02-0.1060.809-0.2440.512-0.1060.9070.0140.465-2.041-0.525-0.665-0.294
06-0.919-1.4060.488-2.3930.70.1560.3080.579-0.919-0.1060.014-0.462-0.525-0.5250.70.156
07-0.196-0.4620.087-0.15-0.024-0.665-0.593-0.15-0.4620.5570.5790.621-0.294-0.8270.557-0.294
08-0.244-0.0650.336-2.9390.1560.415-0.525-2.9390.2191.0370.052-2.939-0.5930.8420.363-4.236
09-1.4061.235-2.939-4.236-1.021.97-4.236-2.939-1.7821.418-2.393-2.393-4.236-2.939-4.236-2.393
10-0.294-4.236-4.236-4.2362.601-2.041-0.347-0.742-2.393-2.939-4.236-4.236-1.782-4.236-2.939-4.236
11-1.262.308-0.1061.177-4.236-1.782-4.236-4.236-4.236-0.403-4.236-2.393-4.236-1.02-4.236-2.041
12-4.236-2.939-1.406-4.236-2.939-2.3932.396-2.041-2.939-4.236-0.15-4.236-2.939-2.9391.177-2.041
13-4.236-4.236-4.236-2.041-4.236-4.236-4.236-1.782-2.041-4.236-2.0412.712-4.236-4.236-4.236-1.406
14-4.236-4.236-2.041-4.236-4.236-4.236-4.236-4.236-4.236-4.236-2.041-4.236-4.236-4.2362.712-0.665
15-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.2361.851.762-1.261.051-4.236-1.26-4.236-1.406
16-0.7421.30.465-0.4030.0140.8590.1560.465-2.041-2.041-4.236-2.939-1.5760.1880.336-1.133
17-1.02-0.403-0.827-1.020.4150.826-0.4031.064-0.462-0.065-0.0650.512-0.665-0.3470.014-0.919