We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorArntl
ModelBMAL1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnnbbvbnnSCAYGTGhbn
Best auROC (human)0.859
Best auROC (mouse)0.883
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)15
Aligned words420
TF familyPAS domain factors {1.2.5}
TF subfamilyArnt-like factors {1.2.5.2}
MGIMGI:1096381
EntrezGeneGeneID:11865
(SSTAR profile)
UniProt IDBMAL1_MOUSE
UniProt ACQ9WTL8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.689260000000001
0.0005 8.55016
0.0001 12.50076
GTEx tissue expression atlas Arntl expression
Motifs in JASPAR
MA0603.1 (Arntl; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
018.013.018.031.033.024.038.035.019.034.012.059.08.011.051.016.0
029.015.033.011.016.022.017.027.09.041.048.021.08.029.091.013.0
034.010.021.07.022.047.014.024.019.061.058.051.05.024.033.010.0
042.019.022.07.032.058.032.020.018.044.048.016.010.023.052.07.0
0511.026.016.09.023.058.020.043.023.064.026.041.03.015.013.019.0
0610.06.042.02.052.030.035.046.010.023.026.016.015.015.052.030.0
0721.016.028.022.025.013.014.022.016.045.046.048.019.011.045.019.0
0820.024.036.01.030.039.015.01.032.073.027.01.014.060.037.00.0
096.089.01.00.09.0186.00.01.04.0107.02.02.00.01.00.02.0
1019.00.00.00.0350.03.018.012.02.01.00.00.04.00.01.00.0
117.0261.023.084.00.04.00.00.00.017.00.02.00.09.00.03.0
120.01.06.00.01.02.0285.03.01.00.022.00.01.01.084.03.0
130.00.00.03.00.00.00.04.03.00.03.0391.00.00.00.06.0
140.00.03.00.00.00.00.00.00.00.03.00.00.00.0391.013.0
150.00.00.00.00.00.00.00.0165.0151.07.074.00.07.00.06.0
1612.095.041.017.026.061.030.041.03.03.00.01.05.031.036.08.0
179.017.011.09.039.059.017.075.016.024.024.043.013.018.026.010.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.133-0.665-0.3470.1880.25-0.0650.3890.308-0.2940.279-0.7420.826-1.133-0.8270.681-0.462
02-1.02-0.5250.25-0.827-0.462-0.15-0.4030.052-1.020.4650.621-0.196-1.1330.1221.257-0.665
03-1.782-0.919-0.196-1.26-0.150.6-0.593-0.065-0.2940.8590.8090.681-1.576-0.0650.25-0.919
04-2.393-0.294-0.15-1.260.2190.8090.219-0.244-0.3470.5350.621-0.462-0.919-0.1060.7-1.26
05-0.8270.014-0.462-1.02-0.1060.809-0.2440.512-0.1060.9070.0140.465-2.041-0.525-0.665-0.294
06-0.919-1.4060.488-2.3930.70.1560.3080.579-0.919-0.1060.014-0.462-0.525-0.5250.70.156
07-0.196-0.4620.087-0.15-0.024-0.665-0.593-0.15-0.4620.5570.5790.621-0.294-0.8270.557-0.294
08-0.244-0.0650.336-2.9390.1560.415-0.525-2.9390.2191.0370.052-2.939-0.5930.8420.363-4.236
09-1.4061.235-2.939-4.236-1.021.97-4.236-2.939-1.7821.418-2.393-2.393-4.236-2.939-4.236-2.393
10-0.294-4.236-4.236-4.2362.601-2.041-0.347-0.742-2.393-2.939-4.236-4.236-1.782-4.236-2.939-4.236
11-1.262.308-0.1061.177-4.236-1.782-4.236-4.236-4.236-0.403-4.236-2.393-4.236-1.02-4.236-2.041
12-4.236-2.939-1.406-4.236-2.939-2.3932.396-2.041-2.939-4.236-0.15-4.236-2.939-2.9391.177-2.041
13-4.236-4.236-4.236-2.041-4.236-4.236-4.236-1.782-2.041-4.236-2.0412.712-4.236-4.236-4.236-1.406
14-4.236-4.236-2.041-4.236-4.236-4.236-4.236-4.236-4.236-4.236-2.041-4.236-4.236-4.2362.712-0.665
15-4.236-4.236-4.236-4.236-4.236-4.236-4.236-4.2361.851.762-1.261.051-4.236-1.26-4.236-1.406
16-0.7421.30.465-0.4030.0140.8590.1560.465-2.041-2.041-4.236-2.939-1.5760.1880.336-1.133
17-1.02-0.403-0.827-1.020.4150.826-0.4031.064-0.462-0.065-0.0650.512-0.665-0.3470.014-0.919