We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBPTF
(GeneCards)
ModelBPTF_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusnKKnTTGTdKnv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words21
TF family
TF subfamily
HGNCHGNC:3581
EntrezGeneGeneID:2186
(SSTAR profile)
UniProt IDBPTF_HUMAN
UniProt ACQ12830
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.8113399999999995
0.0005 6.3795850000000005
0.0001 7.4586749999999995
GTEx tissue expression atlas BPTF expression
ReMap ChIP-seq dataset list BPTF datasets
Motifs in JASPAR
PCM
ACGT
012.02.08.09.0
021.00.08.012.0
032.01.04.014.0
043.05.07.06.0
051.00.00.020.0
060.00.01.020.0
070.00.016.05.0
081.03.00.017.0
091.00.010.010.0
101.02.07.011.0
113.03.06.09.0
124.09.06.02.0
PWM
ACGT
01-0.778-0.7780.3770.485
02-1.228-2.0670.3770.753
03-0.778-1.228-0.2330.898
04-0.469-0.0420.2560.118
05-1.228-2.067-2.0671.239
06-2.067-2.067-1.2281.239
07-2.067-2.0671.025-0.042
08-1.228-0.469-2.0671.083
09-1.228-2.0670.5820.582
10-1.228-0.7780.2560.671
11-0.469-0.4690.1180.485
12-0.2330.4850.118-0.778