We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorBSX
(GeneCards)
ModelBSH_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length14
Quality
D
Motif rank
0
ConsensusWWWbbvbhTAAYbd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8218
TF familyNK-related factors {3.1.2}
TF subfamilyBSX {3.1.2.3}
HGNCHGNC:20450
EntrezGeneGeneID:390259
(SSTAR profile)
UniProt IDBSH_HUMAN
UniProt ACQ3C1V8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.70596
0.0005 6.481310000000001
0.0001 7.9645600000000005
GTEx tissue expression atlas BSX expression
ReMap ChIP-seq dataset list BSX datasets
Motifs in JASPAR
PCM
ACGT
011794.75755.75633.755028.75
025414.75520.75919.751357.75
035656.25509.25751.251296.25
04983.01538.01553.04139.0
051219.751463.753012.752516.75
063276.51722.52079.51134.5
07724.251888.254527.251073.25
081974.251305.25981.253952.25
096.011.00.08196.0
108196.00.016.01.0
118201.04.04.04.0
12435.0637.0535.06606.0
13768.251877.252194.253373.25
142679.0698.03919.0917.0
PWM
ACGT
01-0.134-0.998-1.1730.895
020.969-1.369-0.802-0.413
031.013-1.391-1.004-0.459
04-0.735-0.289-0.2790.7
05-0.52-0.3380.3830.203
060.467-0.1750.013-0.592
07-1.04-0.0840.79-0.648
08-0.039-0.452-0.7370.654
09-5.518-5.044-6.8161.383
101.383-6.816-4.724-6.449
111.384-5.795-5.795-5.795
12-1.548-1.168-1.3421.168
13-0.981-0.090.0660.496
140.266-1.0770.646-0.805