Model info
| Transcription factor | BSX (GeneCards) | ||||||||
| Model | BSH_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | HT-SELEX | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | WWWbbvbhTAAYbd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 8218 | ||||||||
| TF family | NK-related factors {3.1.2} | ||||||||
| TF subfamily | BSX {3.1.2.3} | ||||||||
| HGNC | HGNC:20450 | ||||||||
| EntrezGene | GeneID:390259 (SSTAR profile) | ||||||||
| UniProt ID | BSH_HUMAN | ||||||||
| UniProt AC | Q3C1V8 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | BSX expression | ||||||||
| ReMap ChIP-seq dataset list | BSX datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1794.75 | 755.75 | 633.75 | 5028.75 |
| 02 | 5414.75 | 520.75 | 919.75 | 1357.75 |
| 03 | 5656.25 | 509.25 | 751.25 | 1296.25 |
| 04 | 983.0 | 1538.0 | 1553.0 | 4139.0 |
| 05 | 1219.75 | 1463.75 | 3012.75 | 2516.75 |
| 06 | 3276.5 | 1722.5 | 2079.5 | 1134.5 |
| 07 | 724.25 | 1888.25 | 4527.25 | 1073.25 |
| 08 | 1974.25 | 1305.25 | 981.25 | 3952.25 |
| 09 | 6.0 | 11.0 | 0.0 | 8196.0 |
| 10 | 8196.0 | 0.0 | 16.0 | 1.0 |
| 11 | 8201.0 | 4.0 | 4.0 | 4.0 |
| 12 | 435.0 | 637.0 | 535.0 | 6606.0 |
| 13 | 768.25 | 1877.25 | 2194.25 | 3373.25 |
| 14 | 2679.0 | 698.0 | 3919.0 | 917.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.134 | -0.998 | -1.173 | 0.895 |
| 02 | 0.969 | -1.369 | -0.802 | -0.413 |
| 03 | 1.013 | -1.391 | -1.004 | -0.459 |
| 04 | -0.735 | -0.289 | -0.279 | 0.7 |
| 05 | -0.52 | -0.338 | 0.383 | 0.203 |
| 06 | 0.467 | -0.175 | 0.013 | -0.592 |
| 07 | -1.04 | -0.084 | 0.79 | -0.648 |
| 08 | -0.039 | -0.452 | -0.737 | 0.654 |
| 09 | -5.518 | -5.044 | -6.816 | 1.383 |
| 10 | 1.383 | -6.816 | -4.724 | -6.449 |
| 11 | 1.384 | -5.795 | -5.795 | -5.795 |
| 12 | -1.548 | -1.168 | -1.342 | 1.168 |
| 13 | -0.981 | -0.09 | 0.066 | 0.496 |
| 14 | 0.266 | -1.077 | 0.646 | -0.805 |