We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCDC5L
(GeneCards)
ModelCDC5L_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusvbGnKdTAAYRWAWb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words10
TF familyMyb/SANT domain factors {3.5.1}
TF subfamilyMyb-like factors {3.5.1.1}
HGNCHGNC:1743
EntrezGeneGeneID:988
(SSTAR profile)
UniProt IDCDC5L_HUMAN
UniProt ACQ99459
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.31386
0.0005 5.94516
0.0001 7.27229
GTEx tissue expression atlas CDC5L expression
ReMap ChIP-seq dataset list CDC5L datasets
Motifs in JASPAR
PCM
ACGT
011.51.56.50.5
020.02.04.04.0
032.00.08.00.0
045.01.01.03.0
050.01.03.06.0
062.00.02.06.0
071.00.00.09.0
089.00.01.00.0
098.00.00.02.0
101.06.00.03.0
116.00.03.01.0
122.01.00.07.0
138.01.01.00.0
146.00.01.03.0
150.752.751.754.75
PWM
ACGT
01-0.393-0.3930.833-1.051
02-1.676-0.1770.3970.397
03-0.177-1.6761.025-1.676
040.595-0.669-0.6690.151
05-1.676-0.6690.1510.76
06-0.177-1.676-0.1770.76
07-0.669-1.676-1.6761.136
081.136-1.676-0.669-1.676
091.025-1.676-1.676-0.177
10-0.6690.76-1.6760.151
110.76-1.6760.151-0.669
12-0.177-0.669-1.6760.901
131.025-0.669-0.669-1.676
140.76-1.676-0.6690.151
15-0.8420.078-0.280.549