We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCEBPA
(GeneCards)
ModelCEBPA_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnvTTKCdhMAbhnbn
Best auROC (human)0.988
Best auROC (mouse)0.991
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)153
Aligned words463
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:1833
EntrezGeneGeneID:1050
(SSTAR profile)
UniProt IDCEBPA_HUMAN
UniProt ACP49715
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.616060000000001
0.0005 12.36921
0.0001 15.42426
GTEx tissue expression atlas CEBPA expression
ReMap ChIP-seq dataset list CEBPA datasets
Motifs in JASPAR
MA0019.1 (Ddit3::Cebpa; Rattus norvegicus)
MA0102.1 (Cebpa; Mus musculus/Rattus norvegicus)
MA0102.3 (CEBPA; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0122.017.042.00.047.028.010.05.058.034.049.07.054.047.036.04.0
021.00.02.0178.03.05.01.0117.01.03.01.0132.01.00.02.013.0
030.01.00.05.01.01.00.06.00.00.02.04.02.05.025.0408.0
040.01.01.01.01.01.03.02.06.00.09.012.040.012.0285.086.0
051.043.01.02.00.013.00.01.01.0291.05.01.01.097.01.02.0
061.01.01.00.0188.068.0108.080.02.03.02.00.01.02.00.03.0
0745.098.07.042.016.036.02.020.015.043.00.053.09.051.03.020.0
0842.040.00.03.0173.051.01.03.05.04.00.03.045.087.01.02.0
09226.010.017.012.0174.01.05.02.00.02.00.00.06.02.01.02.0
1016.0169.067.0154.06.04.00.05.07.04.07.05.04.02.00.010.0
1112.013.03.05.064.064.010.041.023.026.011.014.030.070.023.051.0
1223.039.047.020.049.067.018.039.014.013.08.012.026.033.017.035.0
1313.044.038.017.023.069.015.045.013.034.031.012.011.054.023.018.0
1410.018.023.09.055.083.018.045.07.049.029.022.09.016.030.037.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.264-0.5160.375-4.3310.486-0.026-1.032-1.6890.6950.1660.528-1.3730.6240.4860.222-1.894
02-3.047-4.331-2.5031.812-2.153-1.689-3.0471.394-3.047-2.153-3.0471.514-3.047-4.331-2.503-0.778
03-4.331-3.047-4.331-1.689-3.047-3.047-4.331-1.518-4.331-4.331-2.503-1.894-2.503-1.689-0.1382.64
04-4.331-3.047-3.047-3.047-3.047-3.047-2.153-2.503-1.518-4.331-1.133-0.8560.327-0.8562.2821.087
05-3.0470.398-3.047-2.503-4.331-0.778-4.331-3.047-3.0472.303-1.689-3.047-3.0471.207-3.047-2.503
06-3.047-3.047-3.047-4.3311.8670.8531.3141.015-2.503-2.153-2.503-4.331-3.047-2.503-4.331-2.153
070.4431.217-1.3730.375-0.5760.222-2.503-0.357-0.6390.398-4.3310.606-1.1330.567-2.153-0.357
080.3750.327-4.331-2.1531.7840.567-3.047-2.153-1.689-1.894-4.331-2.1530.4431.098-3.047-2.503
092.05-1.032-0.516-0.8561.789-3.047-1.689-2.503-4.331-2.503-4.331-4.331-1.518-2.503-3.047-2.503
10-0.5761.760.8391.668-1.518-1.894-4.331-1.689-1.373-1.894-1.373-1.689-1.894-2.503-4.331-1.032
11-0.856-0.778-2.153-1.6890.7930.793-1.0320.351-0.22-0.099-0.94-0.7060.0420.882-0.220.567
12-0.220.3010.486-0.3570.5280.839-0.460.301-0.706-0.778-1.246-0.856-0.0990.136-0.5160.194
13-0.7780.4210.276-0.516-0.220.868-0.6390.443-0.7780.1660.074-0.856-0.940.624-0.22-0.46
14-1.032-0.46-0.22-1.1330.6421.052-0.460.443-1.3730.5280.009-0.264-1.133-0.5760.0420.249