We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCEBPA
(GeneCards)
ModelCEBPA_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdRTTKhGCAAYv
Best auROC (human)0.983
Best auROC (mouse)0.991
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)153
Aligned words500
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:1833
EntrezGeneGeneID:1050
(SSTAR profile)
UniProt IDCEBPA_HUMAN
UniProt ACP49715
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.886215
0.0005 6.15834
0.0001 8.22461
GTEx tissue expression atlas CEBPA expression
ReMap ChIP-seq dataset list CEBPA datasets
Motifs in JASPAR
MA0019.1 (Ddit3::Cebpa; Rattus norvegicus)
MA0102.1 (Cebpa; Mus musculus/Rattus norvegicus)
MA0102.3 (CEBPA; Homo sapiens)
PCM
ACGT
01115.066.0183.0136.0
02173.091.0233.03.0
034.02.03.0491.0
041.01.0140.0358.0
0579.04.0310.0107.0
0688.059.058.0295.0
070.00.0498.02.0
0878.0386.00.036.0
09492.05.01.02.0
10495.00.04.01.0
117.0149.088.0256.0
12160.0166.0111.063.0
PWM
ACGT
01-0.082-0.6280.3770.083
020.322-0.3130.617-3.325
03-3.126-3.573-3.3251.359
04-3.903-3.9030.1121.044
05-0.452-3.1260.901-0.153
06-0.346-0.737-0.7540.852
07-4.4-4.41.373-3.573
08-0.4641.119-4.4-1.215
091.361-2.961-3.903-3.573
101.367-4.4-3.126-3.903
11-2.6940.174-0.3460.711
120.2440.281-0.117-0.673