Model info
| Transcription factor | CEBPA (GeneCards) | ||||||||
| Model | CEBPA_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRTTKhGCAAYv | ||||||||
| Best auROC (human) | 0.983 | ||||||||
| Best auROC (mouse) | 0.991 | ||||||||
| Peak sets in benchmark (human) | 18 | ||||||||
| Peak sets in benchmark (mouse) | 153 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | C/EBP-related {1.1.8} | ||||||||
| TF subfamily | C/EBP {1.1.8.1} | ||||||||
| HGNC | HGNC:1833 | ||||||||
| EntrezGene | GeneID:1050 (SSTAR profile) | ||||||||
| UniProt ID | CEBPA_HUMAN | ||||||||
| UniProt AC | P49715 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | CEBPA expression | ||||||||
| ReMap ChIP-seq dataset list | CEBPA datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 115.0 | 66.0 | 183.0 | 136.0 |
| 02 | 173.0 | 91.0 | 233.0 | 3.0 |
| 03 | 4.0 | 2.0 | 3.0 | 491.0 |
| 04 | 1.0 | 1.0 | 140.0 | 358.0 |
| 05 | 79.0 | 4.0 | 310.0 | 107.0 |
| 06 | 88.0 | 59.0 | 58.0 | 295.0 |
| 07 | 0.0 | 0.0 | 498.0 | 2.0 |
| 08 | 78.0 | 386.0 | 0.0 | 36.0 |
| 09 | 492.0 | 5.0 | 1.0 | 2.0 |
| 10 | 495.0 | 0.0 | 4.0 | 1.0 |
| 11 | 7.0 | 149.0 | 88.0 | 256.0 |
| 12 | 160.0 | 166.0 | 111.0 | 63.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.082 | -0.628 | 0.377 | 0.083 |
| 02 | 0.322 | -0.313 | 0.617 | -3.325 |
| 03 | -3.126 | -3.573 | -3.325 | 1.359 |
| 04 | -3.903 | -3.903 | 0.112 | 1.044 |
| 05 | -0.452 | -3.126 | 0.901 | -0.153 |
| 06 | -0.346 | -0.737 | -0.754 | 0.852 |
| 07 | -4.4 | -4.4 | 1.373 | -3.573 |
| 08 | -0.464 | 1.119 | -4.4 | -1.215 |
| 09 | 1.361 | -2.961 | -3.903 | -3.573 |
| 10 | 1.367 | -4.4 | -3.126 | -3.903 |
| 11 | -2.694 | 0.174 | -0.346 | 0.711 |
| 12 | 0.244 | 0.281 | -0.117 | -0.673 |