We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCebpa
ModelCEBPA_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnvTTGCdhMAbhn
Best auROC (human)0.987
Best auROC (mouse)0.992
Peak sets in benchmark (human)18
Peak sets in benchmark (mouse)153
Aligned words411
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
MGIMGI:99480
EntrezGeneGeneID:12606
(SSTAR profile)
UniProt IDCEBPA_MOUSE
UniProt ACP53566
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.95281
0.0005 12.23292
0.0001 16.043745
GTEx tissue expression atlas Cebpa expression
Motifs in JASPAR
MA0019.1 (Ddit3::Cebpa; Rattus norvegicus)
MA0102.1 (Cebpa; Mus musculus/Rattus norvegicus)
MA0102.3 (CEBPA; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0131.05.045.01.051.018.014.02.047.018.041.05.059.034.036.01.0
020.01.00.0187.00.01.00.074.00.01.03.0132.00.02.00.07.0
030.00.00.00.00.00.00.05.01.00.00.02.00.00.010.0390.0
040.00.01.00.00.00.00.00.02.00.04.04.035.01.0319.042.0
050.036.00.01.00.01.00.00.00.0321.02.01.01.045.00.00.0
060.01.00.00.0194.062.073.074.01.01.00.00.00.00.01.01.0
0740.0104.09.042.016.029.00.019.019.034.01.020.07.035.00.033.0
0828.053.01.00.0188.013.00.01.02.07.01.00.044.069.01.00.0
09253.01.03.05.0139.02.00.01.01.00.00.02.00.00.01.00.0
1018.0160.067.0148.01.00.00.02.00.02.01.01.01.04.01.02.0
116.05.02.07.064.052.012.038.033.019.07.010.039.062.027.025.0
1223.035.050.034.031.044.011.052.014.011.010.013.09.033.017.021.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.193-1.5710.562-2.9340.686-0.342-0.588-2.3880.605-0.3420.469-1.5710.8310.2840.341-2.934
02-4.232-2.934-4.2321.98-4.232-2.934-4.2321.056-4.232-2.934-2.0371.632-4.232-2.388-4.232-1.255
03-4.232-4.232-4.232-4.232-4.232-4.232-4.232-1.571-2.934-4.232-4.232-2.388-4.232-4.232-0.9142.714
04-4.232-4.232-2.934-4.232-4.232-4.232-4.232-4.232-2.388-4.232-1.777-1.7770.313-2.9342.5130.493
05-4.2320.341-4.232-2.934-4.232-2.934-4.232-4.232-4.2322.519-2.388-2.934-2.9340.562-4.232-4.232
06-4.232-2.934-4.232-4.2322.0160.881.0421.056-2.934-2.934-4.232-4.232-4.232-4.232-2.934-2.934
070.4451.395-1.0150.493-0.4580.127-4.232-0.289-0.2890.284-2.934-0.239-1.2550.313-4.2320.255
080.0920.724-2.934-4.2321.985-0.66-4.232-2.934-2.388-1.255-2.934-4.2320.5390.986-2.934-4.232
092.282-2.934-2.037-1.5711.684-2.388-4.232-2.934-2.934-4.232-4.232-2.388-4.232-4.232-2.934-4.232
10-0.3421.8240.9571.746-2.934-4.232-4.232-2.388-4.232-2.388-2.934-2.934-2.934-1.777-2.934-2.388
11-1.401-1.571-2.388-1.2550.9110.705-0.7380.3940.255-0.289-1.255-0.9140.420.880.056-0.02
12-0.1020.3130.6660.2840.1930.539-0.8220.705-0.588-0.822-0.914-0.66-1.0150.255-0.398-0.191