Model info
| Transcription factor | Cebpa | ||||||||
| Model | CEBPA_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvTTKhGCAAY | ||||||||
| Best auROC (human) | 0.984 | ||||||||
| Best auROC (mouse) | 0.991 | ||||||||
| Peak sets in benchmark (human) | 18 | ||||||||
| Peak sets in benchmark (mouse) | 153 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | C/EBP-related {1.1.8} | ||||||||
| TF subfamily | C/EBP {1.1.8.1} | ||||||||
| MGI | MGI:99480 | ||||||||
| EntrezGene | GeneID:12606 (SSTAR profile) | ||||||||
| UniProt ID | CEBPA_MOUSE | ||||||||
| UniProt AC | P53566 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Cebpa expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 105.0 | 60.0 | 171.0 | 163.0 |
| 02 | 158.0 | 111.0 | 223.0 | 7.0 |
| 03 | 2.0 | 3.0 | 2.0 | 492.0 |
| 04 | 4.0 | 1.0 | 149.0 | 345.0 |
| 05 | 99.0 | 1.0 | 275.0 | 124.0 |
| 06 | 81.0 | 76.0 | 72.0 | 270.0 |
| 07 | 2.0 | 0.0 | 496.0 | 1.0 |
| 08 | 81.0 | 385.0 | 0.0 | 33.0 |
| 09 | 491.0 | 8.0 | 0.0 | 0.0 |
| 10 | 496.0 | 0.0 | 2.0 | 1.0 |
| 11 | 5.0 | 149.0 | 95.0 | 250.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.17 | -0.719 | 0.312 | 0.265 |
| 02 | 0.234 | -0.115 | 0.575 | -2.692 |
| 03 | -3.571 | -3.323 | -3.571 | 1.363 |
| 04 | -3.124 | -3.901 | 0.176 | 1.009 |
| 05 | -0.228 | -3.901 | 0.784 | -0.006 |
| 06 | -0.425 | -0.488 | -0.541 | 0.765 |
| 07 | -3.571 | -4.398 | 1.371 | -3.901 |
| 08 | -0.425 | 1.119 | -4.398 | -1.296 |
| 09 | 1.361 | -2.582 | -4.398 | -4.398 |
| 10 | 1.371 | -4.398 | -3.571 | -3.901 |
| 11 | -2.959 | 0.176 | -0.269 | 0.689 |