We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCEBPB
(GeneCards)
ModelCEBPB_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusndRTTGCRYAAYnnhn
Best auROC (human)0.982
Best auROC (mouse)0.985
Peak sets in benchmark (human)65
Peak sets in benchmark (mouse)158
Aligned words380
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:1834
EntrezGeneGeneID:1051
(SSTAR profile)
UniProt IDCEBPB_HUMAN
UniProt ACP17676
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.36046
0.0005 7.85506
0.0001 14.36311
GTEx tissue expression atlas CEBPB expression
ReMap ChIP-seq dataset list CEBPB datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.016.065.024.016.010.016.034.022.09.045.034.011.07.033.020.0
0242.07.017.00.035.04.02.01.0132.09.018.00.055.018.039.00.0
030.00.00.0264.00.00.00.038.00.00.00.076.00.00.00.01.0
040.00.00.00.00.00.00.00.00.00.00.00.00.00.00.0379.0
050.00.00.00.00.00.00.00.00.00.00.00.01.00.0375.03.0
060.01.00.00.00.00.00.00.00.0375.00.00.00.03.00.00.0
070.00.00.00.0165.014.0186.014.00.00.00.00.00.00.00.00.0
0820.0100.00.045.01.012.00.01.037.099.00.050.00.012.00.02.0
0921.037.00.00.0198.025.00.00.00.00.00.00.064.034.00.00.0
10283.00.00.00.096.00.00.00.00.00.00.00.00.00.00.00.0
118.0180.024.0167.00.00.00.00.00.00.00.00.00.00.00.00.0
120.04.01.03.058.048.06.068.06.07.08.03.041.059.032.035.0
1320.033.038.014.042.040.010.026.06.013.015.013.011.030.053.015.0
1421.026.015.017.021.038.010.047.014.075.020.07.010.028.013.017.0
1519.013.022.012.076.044.010.037.011.011.020.016.011.018.028.031.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.326-0.3851.00.013-0.385-0.841-0.3850.357-0.073-0.9430.6340.357-0.749-1.1830.327-0.166
020.566-1.183-0.326-4.1720.385-1.705-2.317-2.8651.705-0.943-0.27-4.1720.834-0.270.493-4.172
03-4.172-4.172-4.1722.397-4.172-4.172-4.1720.467-4.172-4.172-4.1721.155-4.172-4.172-4.172-2.865
04-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.1722.758
05-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-2.865-4.1722.747-1.965
06-4.172-2.865-4.172-4.172-4.172-4.172-4.172-4.172-4.1722.747-4.172-4.172-4.172-1.965-4.172-4.172
07-4.172-4.172-4.172-4.1721.928-0.5152.047-0.515-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172
08-0.1661.428-4.1720.634-2.865-0.665-4.172-2.8650.441.418-4.1720.739-4.172-0.665-4.172-2.317
09-0.1180.44-4.172-4.1722.110.053-4.172-4.172-4.172-4.172-4.172-4.1720.9840.357-4.172-4.172
102.466-4.172-4.172-4.1721.388-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172
11-1.0562.0150.0131.94-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172-4.172
12-4.172-1.705-2.865-1.9650.8860.698-1.3291.044-1.329-1.183-1.056-1.9650.5420.9030.2970.385
13-0.1660.3270.467-0.5150.5660.518-0.8410.092-1.329-0.587-0.448-0.587-0.7490.2330.797-0.448
14-0.1180.092-0.448-0.326-0.1180.467-0.8410.678-0.5151.142-0.166-1.183-0.8410.165-0.587-0.326
15-0.217-0.587-0.073-0.6651.1550.612-0.8410.44-0.749-0.749-0.166-0.385-0.749-0.270.1650.265