Transcription factor | CEBPB (GeneCards) | ||||||||
Model | CEBPB_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 16 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndRTTGCRYAAYnnhn | ||||||||
Best auROC (human) | 0.982 | ||||||||
Best auROC (mouse) | 0.985 | ||||||||
Peak sets in benchmark (human) | 65 | ||||||||
Peak sets in benchmark (mouse) | 158 | ||||||||
Aligned words | 380 | ||||||||
TF family | C/EBP-related {1.1.8} | ||||||||
TF subfamily | C/EBP {1.1.8.1} | ||||||||
HGNC | HGNC:1834 | ||||||||
EntrezGene | GeneID:1051 (SSTAR profile) | ||||||||
UniProt ID | CEBPB_HUMAN | ||||||||
UniProt AC | P17676 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | CEBPB expression | ||||||||
ReMap ChIP-seq dataset list | CEBPB datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 17.0 | 16.0 | 65.0 | 24.0 | 16.0 | 10.0 | 16.0 | 34.0 | 22.0 | 9.0 | 45.0 | 34.0 | 11.0 | 7.0 | 33.0 | 20.0 |
02 | 42.0 | 7.0 | 17.0 | 0.0 | 35.0 | 4.0 | 2.0 | 1.0 | 132.0 | 9.0 | 18.0 | 0.0 | 55.0 | 18.0 | 39.0 | 0.0 |
03 | 0.0 | 0.0 | 0.0 | 264.0 | 0.0 | 0.0 | 0.0 | 38.0 | 0.0 | 0.0 | 0.0 | 76.0 | 0.0 | 0.0 | 0.0 | 1.0 |
04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 379.0 |
05 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 375.0 | 3.0 |
06 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 375.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 |
07 | 0.0 | 0.0 | 0.0 | 0.0 | 165.0 | 14.0 | 186.0 | 14.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
08 | 20.0 | 100.0 | 0.0 | 45.0 | 1.0 | 12.0 | 0.0 | 1.0 | 37.0 | 99.0 | 0.0 | 50.0 | 0.0 | 12.0 | 0.0 | 2.0 |
09 | 21.0 | 37.0 | 0.0 | 0.0 | 198.0 | 25.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 64.0 | 34.0 | 0.0 | 0.0 |
10 | 283.0 | 0.0 | 0.0 | 0.0 | 96.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
11 | 8.0 | 180.0 | 24.0 | 167.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
12 | 0.0 | 4.0 | 1.0 | 3.0 | 58.0 | 48.0 | 6.0 | 68.0 | 6.0 | 7.0 | 8.0 | 3.0 | 41.0 | 59.0 | 32.0 | 35.0 |
13 | 20.0 | 33.0 | 38.0 | 14.0 | 42.0 | 40.0 | 10.0 | 26.0 | 6.0 | 13.0 | 15.0 | 13.0 | 11.0 | 30.0 | 53.0 | 15.0 |
14 | 21.0 | 26.0 | 15.0 | 17.0 | 21.0 | 38.0 | 10.0 | 47.0 | 14.0 | 75.0 | 20.0 | 7.0 | 10.0 | 28.0 | 13.0 | 17.0 |
15 | 19.0 | 13.0 | 22.0 | 12.0 | 76.0 | 44.0 | 10.0 | 37.0 | 11.0 | 11.0 | 20.0 | 16.0 | 11.0 | 18.0 | 28.0 | 31.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.326 | -0.385 | 1.0 | 0.013 | -0.385 | -0.841 | -0.385 | 0.357 | -0.073 | -0.943 | 0.634 | 0.357 | -0.749 | -1.183 | 0.327 | -0.166 |
02 | 0.566 | -1.183 | -0.326 | -4.172 | 0.385 | -1.705 | -2.317 | -2.865 | 1.705 | -0.943 | -0.27 | -4.172 | 0.834 | -0.27 | 0.493 | -4.172 |
03 | -4.172 | -4.172 | -4.172 | 2.397 | -4.172 | -4.172 | -4.172 | 0.467 | -4.172 | -4.172 | -4.172 | 1.155 | -4.172 | -4.172 | -4.172 | -2.865 |
04 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | 2.758 |
05 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -2.865 | -4.172 | 2.747 | -1.965 |
06 | -4.172 | -2.865 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | 2.747 | -4.172 | -4.172 | -4.172 | -1.965 | -4.172 | -4.172 |
07 | -4.172 | -4.172 | -4.172 | -4.172 | 1.928 | -0.515 | 2.047 | -0.515 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 |
08 | -0.166 | 1.428 | -4.172 | 0.634 | -2.865 | -0.665 | -4.172 | -2.865 | 0.44 | 1.418 | -4.172 | 0.739 | -4.172 | -0.665 | -4.172 | -2.317 |
09 | -0.118 | 0.44 | -4.172 | -4.172 | 2.11 | 0.053 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | 0.984 | 0.357 | -4.172 | -4.172 |
10 | 2.466 | -4.172 | -4.172 | -4.172 | 1.388 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 |
11 | -1.056 | 2.015 | 0.013 | 1.94 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 | -4.172 |
12 | -4.172 | -1.705 | -2.865 | -1.965 | 0.886 | 0.698 | -1.329 | 1.044 | -1.329 | -1.183 | -1.056 | -1.965 | 0.542 | 0.903 | 0.297 | 0.385 |
13 | -0.166 | 0.327 | 0.467 | -0.515 | 0.566 | 0.518 | -0.841 | 0.092 | -1.329 | -0.587 | -0.448 | -0.587 | -0.749 | 0.233 | 0.797 | -0.448 |
14 | -0.118 | 0.092 | -0.448 | -0.326 | -0.118 | 0.467 | -0.841 | 0.678 | -0.515 | 1.142 | -0.166 | -1.183 | -0.841 | 0.165 | -0.587 | -0.326 |
15 | -0.217 | -0.587 | -0.073 | -0.665 | 1.155 | 0.612 | -0.841 | 0.44 | -0.749 | -0.749 | -0.166 | -0.385 | -0.749 | -0.27 | 0.165 | 0.265 |