We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCEBPB
(GeneCards)
ModelCEBPB_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdRTTRhGCAAYv
Best auROC (human)0.981
Best auROC (mouse)0.985
Peak sets in benchmark (human)65
Peak sets in benchmark (mouse)158
Aligned words457
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:1834
EntrezGeneGeneID:1051
(SSTAR profile)
UniProt IDCEBPB_HUMAN
UniProt ACP17676
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.31214
0.0005 5.663345
0.0001 8.166715
GTEx tissue expression atlas CEBPB expression
ReMap ChIP-seq dataset list CEBPB datasets
Motifs in JASPAR
PCM
ACGT
01108.045.0160.0141.0
02206.060.0176.012.0
030.01.01.0452.0
040.00.0136.0318.0
05137.01.0233.083.0
0676.0118.037.0223.0
070.00.0454.00.0
0837.0408.00.09.0
09454.00.00.00.0
10454.00.00.00.0
110.0111.067.0276.0
12168.0151.083.052.0
PWM
ACGT
01-0.049-0.9050.3390.214
020.59-0.6260.434-2.14
03-4.32-3.817-3.8171.372
04-4.32-4.320.1791.022
050.186-3.8170.712-0.308
06-0.3950.038-1.0940.669
07-4.32-4.321.376-4.32
08-1.0941.27-4.32-2.391
091.376-4.32-4.32-4.32
101.376-4.32-4.32-4.32
11-4.32-0.022-0.5180.881
120.3880.282-0.308-0.765