Model info
| Transcription factor | CEBPB (GeneCards) | ||||||||
| Model | CEBPB_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRTTRhGCAAYv | ||||||||
| Best auROC (human) | 0.981 | ||||||||
| Best auROC (mouse) | 0.985 | ||||||||
| Peak sets in benchmark (human) | 65 | ||||||||
| Peak sets in benchmark (mouse) | 158 | ||||||||
| Aligned words | 457 | ||||||||
| TF family | C/EBP-related {1.1.8} | ||||||||
| TF subfamily | C/EBP {1.1.8.1} | ||||||||
| HGNC | HGNC:1834 | ||||||||
| EntrezGene | GeneID:1051 (SSTAR profile) | ||||||||
| UniProt ID | CEBPB_HUMAN | ||||||||
| UniProt AC | P17676 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | CEBPB expression | ||||||||
| ReMap ChIP-seq dataset list | CEBPB datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 108.0 | 45.0 | 160.0 | 141.0 |
| 02 | 206.0 | 60.0 | 176.0 | 12.0 |
| 03 | 0.0 | 1.0 | 1.0 | 452.0 |
| 04 | 0.0 | 0.0 | 136.0 | 318.0 |
| 05 | 137.0 | 1.0 | 233.0 | 83.0 |
| 06 | 76.0 | 118.0 | 37.0 | 223.0 |
| 07 | 0.0 | 0.0 | 454.0 | 0.0 |
| 08 | 37.0 | 408.0 | 0.0 | 9.0 |
| 09 | 454.0 | 0.0 | 0.0 | 0.0 |
| 10 | 454.0 | 0.0 | 0.0 | 0.0 |
| 11 | 0.0 | 111.0 | 67.0 | 276.0 |
| 12 | 168.0 | 151.0 | 83.0 | 52.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.049 | -0.905 | 0.339 | 0.214 |
| 02 | 0.59 | -0.626 | 0.434 | -2.14 |
| 03 | -4.32 | -3.817 | -3.817 | 1.372 |
| 04 | -4.32 | -4.32 | 0.179 | 1.022 |
| 05 | 0.186 | -3.817 | 0.712 | -0.308 |
| 06 | -0.395 | 0.038 | -1.094 | 0.669 |
| 07 | -4.32 | -4.32 | 1.376 | -4.32 |
| 08 | -1.094 | 1.27 | -4.32 | -2.391 |
| 09 | 1.376 | -4.32 | -4.32 | -4.32 |
| 10 | 1.376 | -4.32 | -4.32 | -4.32 |
| 11 | -4.32 | -0.022 | -0.518 | 0.881 |
| 12 | 0.388 | 0.282 | -0.308 | -0.765 |