Transcription factor | Cebpb | ||||||||
Model | CEBPB_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 16 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nbRTTKCdYAAYhnhn | ||||||||
Best auROC (human) | 0.982 | ||||||||
Best auROC (mouse) | 0.989 | ||||||||
Peak sets in benchmark (human) | 65 | ||||||||
Peak sets in benchmark (mouse) | 158 | ||||||||
Aligned words | 505 | ||||||||
TF family | C/EBP-related {1.1.8} | ||||||||
TF subfamily | C/EBP {1.1.8.1} | ||||||||
MGI | MGI:88373 | ||||||||
EntrezGene | GeneID:12608 (SSTAR profile) | ||||||||
UniProt ID | CEBPB_MOUSE | ||||||||
UniProt AC | P28033 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Cebpb expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 20.0 | 31.0 | 28.0 | 32.0 | 21.0 | 18.0 | 22.0 | 60.0 | 12.0 | 32.0 | 35.0 | 45.0 | 13.0 | 17.0 | 80.0 | 33.0 |
02 | 27.0 | 8.0 | 29.0 | 2.0 | 66.0 | 15.0 | 13.0 | 4.0 | 83.0 | 26.0 | 54.0 | 2.0 | 76.0 | 33.0 | 58.0 | 3.0 |
03 | 0.0 | 1.0 | 0.0 | 251.0 | 1.0 | 0.0 | 0.0 | 81.0 | 1.0 | 0.0 | 0.0 | 153.0 | 0.0 | 0.0 | 0.0 | 11.0 |
04 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 493.0 |
05 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.0 | 1.0 | 24.0 | 0.0 | 362.0 | 109.0 |
06 | 0.0 | 24.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 363.0 | 1.0 | 1.0 | 0.0 | 109.0 | 1.0 | 0.0 |
07 | 0.0 | 0.0 | 0.0 | 0.0 | 238.0 | 49.0 | 133.0 | 76.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 |
08 | 32.0 | 137.0 | 3.0 | 66.0 | 10.0 | 28.0 | 0.0 | 12.0 | 22.0 | 69.0 | 0.0 | 43.0 | 4.0 | 48.0 | 0.0 | 25.0 |
09 | 27.0 | 41.0 | 0.0 | 0.0 | 263.0 | 19.0 | 0.0 | 0.0 | 1.0 | 2.0 | 0.0 | 0.0 | 60.0 | 85.0 | 1.0 | 0.0 |
10 | 344.0 | 0.0 | 1.0 | 6.0 | 146.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
11 | 2.0 | 190.0 | 57.0 | 241.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 8.0 |
12 | 0.0 | 1.0 | 0.0 | 1.0 | 69.0 | 50.0 | 8.0 | 64.0 | 20.0 | 25.0 | 4.0 | 8.0 | 42.0 | 111.0 | 37.0 | 59.0 |
13 | 17.0 | 38.0 | 47.0 | 29.0 | 49.0 | 59.0 | 14.0 | 65.0 | 4.0 | 19.0 | 9.0 | 17.0 | 9.0 | 32.0 | 30.0 | 61.0 |
14 | 13.0 | 20.0 | 21.0 | 25.0 | 36.0 | 52.0 | 9.0 | 51.0 | 18.0 | 45.0 | 21.0 | 16.0 | 16.0 | 81.0 | 27.0 | 48.0 |
15 | 13.0 | 33.0 | 23.0 | 14.0 | 39.0 | 71.0 | 11.0 | 77.0 | 23.0 | 30.0 | 9.0 | 16.0 | 20.0 | 31.0 | 38.0 | 51.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.437 | -0.006 | -0.106 | 0.025 | -0.39 | -0.541 | -0.344 | 0.648 | -0.936 | 0.025 | 0.114 | 0.363 | -0.858 | -0.597 | 0.934 | 0.056 |
02 | -0.142 | -1.326 | -0.072 | -2.582 | 0.743 | -0.719 | -0.858 | -1.973 | 0.971 | -0.179 | 0.544 | -2.582 | 0.883 | 0.056 | 0.615 | -2.232 |
03 | -4.398 | -3.124 | -4.398 | 2.075 | -3.124 | -4.398 | -4.398 | 0.947 | -3.124 | -4.398 | -4.398 | 1.581 | -4.398 | -4.398 | -4.398 | -1.02 |
04 | -4.398 | -4.398 | -3.124 | -3.124 | -4.398 | -4.398 | -4.398 | -3.124 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -2.232 | 2.749 |
05 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -2.232 | -3.124 | -0.258 | -4.398 | 2.44 | 1.243 |
06 | -4.398 | -0.258 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | 2.443 | -3.124 | -3.124 | -4.398 | 1.243 | -3.124 | -4.398 |
07 | -4.398 | -4.398 | -4.398 | -4.398 | 2.022 | 0.447 | 1.441 | 0.883 | -4.398 | -3.124 | -4.398 | -3.124 | -4.398 | -4.398 | -3.124 | -4.398 |
08 | 0.025 | 1.47 | -2.232 | 0.743 | -1.112 | -0.106 | -4.398 | -0.936 | -0.344 | 0.787 | -4.398 | 0.318 | -1.973 | 0.427 | -4.398 | -0.218 |
09 | -0.142 | 0.271 | -4.398 | -4.398 | 2.121 | -0.488 | -4.398 | -4.398 | -3.124 | -2.582 | -4.398 | -4.398 | 0.648 | 0.995 | -3.124 | -4.398 |
10 | 2.389 | -4.398 | -3.124 | -1.598 | 1.534 | -4.398 | -4.398 | -3.124 | -4.398 | -4.398 | -4.398 | -3.124 | -4.398 | -4.398 | -4.398 | -4.398 |
11 | -2.582 | 1.797 | 0.597 | 2.034 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -3.124 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -1.326 |
12 | -4.398 | -3.124 | -4.398 | -3.124 | 0.787 | 0.467 | -1.326 | 0.713 | -0.437 | -0.218 | -1.973 | -1.326 | 0.294 | 1.261 | 0.169 | 0.632 |
13 | -0.597 | 0.195 | 0.406 | -0.072 | 0.447 | 0.632 | -0.786 | 0.728 | -1.973 | -0.488 | -1.213 | -0.597 | -1.213 | 0.025 | -0.038 | 0.665 |
14 | -0.858 | -0.437 | -0.39 | -0.218 | 0.142 | 0.506 | -1.213 | 0.487 | -0.541 | 0.363 | -0.39 | -0.656 | -0.656 | 0.947 | -0.142 | 0.427 |
15 | -0.858 | 0.056 | -0.3 | -0.786 | 0.221 | 0.816 | -1.02 | 0.896 | -0.3 | -0.038 | -1.213 | -0.656 | -0.437 | -0.006 | 0.195 | 0.487 |