We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCEBPD
(GeneCards)
ModelCEBPD_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusnRTTGCnYAAYhn
Best auROC (human)0.809
Best auROC (mouse)
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)
Aligned words307
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:1835
EntrezGeneGeneID:1052
(SSTAR profile)
UniProt IDCEBPD_HUMAN
UniProt ACP49716
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.75377
0.0005 10.917470000000002
0.0001 15.461345
GTEx tissue expression atlas CEBPD expression
ReMap ChIP-seq dataset list CEBPD datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0118.05.026.01.049.013.012.03.063.06.029.01.027.022.029.00.0
021.03.00.0153.00.07.00.039.00.06.00.090.00.00.00.05.0
030.00.00.01.00.01.00.015.00.00.00.00.01.00.05.0281.0
040.00.01.00.00.00.01.00.00.00.01.04.03.01.0267.026.0
050.03.00.00.00.01.00.00.00.0270.00.00.00.028.02.00.0
060.00.00.00.0138.034.095.035.01.01.00.00.00.00.00.00.0
0715.094.04.026.00.027.00.08.04.053.03.035.00.025.00.010.0
085.014.00.00.0175.022.02.00.02.04.00.01.032.047.00.00.0
09210.03.01.00.080.03.00.04.01.00.00.01.01.00.00.00.0
1010.0149.032.0101.01.04.01.00.01.00.00.00.01.02.01.01.0
110.010.02.01.043.055.03.054.015.012.06.01.020.046.017.019.0
1211.020.029.018.034.035.016.038.06.010.06.06.05.020.036.014.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.053-1.2850.309-2.6580.936-0.371-0.449-1.7521.186-1.1130.416-2.6580.3460.1440.416-3.992
02-2.658-1.752-3.9922.07-3.992-0.967-3.9920.71-3.992-1.113-3.9921.541-3.992-3.992-3.992-1.285
03-3.992-3.992-3.992-2.658-3.992-2.658-3.992-0.231-3.992-3.992-3.992-3.992-2.658-3.992-1.2852.677
04-3.992-3.992-2.658-3.992-3.992-3.992-2.658-3.992-3.992-3.992-2.658-1.491-1.752-2.6582.6260.309
05-3.992-1.752-3.992-3.992-3.992-2.658-3.992-3.992-3.9922.637-3.992-3.992-3.9920.382-2.106-3.992
06-3.992-3.992-3.992-3.9921.9670.5741.5950.602-2.658-2.658-3.992-3.992-3.992-3.992-3.992-3.992
07-0.2311.584-1.4910.309-3.9920.346-3.992-0.84-1.4911.014-1.7520.602-3.9920.27-3.992-0.625
08-1.285-0.299-3.992-3.9922.2040.144-2.106-3.992-2.106-1.491-3.992-2.6580.5140.895-3.992-3.992
092.386-1.752-2.658-3.9921.423-1.752-3.992-1.491-2.658-3.992-3.992-2.658-2.658-3.992-3.992-3.992
10-0.6252.0430.5141.656-2.658-1.491-2.658-3.992-2.658-3.992-3.992-3.992-2.658-2.106-2.658-2.658
11-3.992-0.625-2.106-2.6580.8061.051-1.7521.033-0.231-0.449-1.113-2.6580.050.873-0.1090.0
12-0.5330.050.416-0.0530.5740.602-0.1680.684-1.113-0.625-1.113-1.113-1.2850.050.63-0.299