We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCEBPD
(GeneCards)
ModelCEBPD_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusvTTGCdYMAbh
Best auROC (human)0.831
Best auROC (mouse)
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)
Aligned words500
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:1835
EntrezGeneGeneID:1052
(SSTAR profile)
UniProt IDCEBPD_HUMAN
UniProt ACP49716
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.262345
0.0005 6.037519999999999
0.0001 7.59178
GTEx tissue expression atlas CEBPD expression
ReMap ChIP-seq dataset list CEBPD datasets
Motifs in JASPAR
PCM
ACGT
01227.25116.25134.2522.25
021.2565.2510.25423.25
033.2514.259.25473.25
0421.2513.25406.2559.25
058.25480.255.256.25
06229.2560.25139.2571.25
0761.25290.2513.25135.25
08295.25191.252.2511.25
09414.2532.2522.2531.25
1012.0241.089.0158.0
11104.0244.036.0116.0
PWM
ACGT
010.592-0.0720.071-1.671
02-3.81-0.639-2.3721.211
03-3.271-2.08-2.4611.322
04-1.714-2.1461.17-0.733
05-2.5581.337-2.923-2.786
060.601-0.7170.107-0.553
07-0.7010.835-2.1460.078
080.8520.421-3.505-2.291
091.19-1.32-1.671-1.35
10-2.2340.651-0.3350.232
11-0.1810.663-1.215-0.074