Model info
| Transcription factor | CEBPD (GeneCards) | ||||||||
| Model | CEBPD_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vTTGCdYMAbh | ||||||||
| Best auROC (human) | 0.831 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | C/EBP-related {1.1.8} | ||||||||
| TF subfamily | C/EBP {1.1.8.1} | ||||||||
| HGNC | HGNC:1835 | ||||||||
| EntrezGene | GeneID:1052 (SSTAR profile) | ||||||||
| UniProt ID | CEBPD_HUMAN | ||||||||
| UniProt AC | P49716 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | CEBPD expression | ||||||||
| ReMap ChIP-seq dataset list | CEBPD datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 227.25 | 116.25 | 134.25 | 22.25 |
| 02 | 1.25 | 65.25 | 10.25 | 423.25 |
| 03 | 3.25 | 14.25 | 9.25 | 473.25 |
| 04 | 21.25 | 13.25 | 406.25 | 59.25 |
| 05 | 8.25 | 480.25 | 5.25 | 6.25 |
| 06 | 229.25 | 60.25 | 139.25 | 71.25 |
| 07 | 61.25 | 290.25 | 13.25 | 135.25 |
| 08 | 295.25 | 191.25 | 2.25 | 11.25 |
| 09 | 414.25 | 32.25 | 22.25 | 31.25 |
| 10 | 12.0 | 241.0 | 89.0 | 158.0 |
| 11 | 104.0 | 244.0 | 36.0 | 116.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.592 | -0.072 | 0.071 | -1.671 |
| 02 | -3.81 | -0.639 | -2.372 | 1.211 |
| 03 | -3.271 | -2.08 | -2.461 | 1.322 |
| 04 | -1.714 | -2.146 | 1.17 | -0.733 |
| 05 | -2.558 | 1.337 | -2.923 | -2.786 |
| 06 | 0.601 | -0.717 | 0.107 | -0.553 |
| 07 | -0.701 | 0.835 | -2.146 | 0.078 |
| 08 | 0.852 | 0.421 | -3.505 | -2.291 |
| 09 | 1.19 | -1.32 | -1.671 | -1.35 |
| 10 | -2.234 | 0.651 | -0.335 | 0.232 |
| 11 | -0.181 | 0.663 | -1.215 | -0.074 |