Transcription factor | CEBPG (GeneCards) | ||||||||
Model | CEBPG_HUMAN.H11DI.0.B | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | B | ||||||||
Motif rank | 0 | ||||||||
Consensus | nRTTKCATCAKhhn | ||||||||
Best auROC (human) | 0.702 | ||||||||
Best auROC (mouse) | 0.973 | ||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | 4 | ||||||||
Aligned words | 472 | ||||||||
TF family | C/EBP-related {1.1.8} | ||||||||
TF subfamily | C/EBP {1.1.8.1} | ||||||||
HGNC | HGNC:1837 | ||||||||
EntrezGene | GeneID:1054 (SSTAR profile) | ||||||||
UniProt ID | CEBPG_HUMAN | ||||||||
UniProt AC | P53567 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | CEBPG expression | ||||||||
ReMap ChIP-seq dataset list | CEBPG datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 38.0 | 11.0 | 44.0 | 0.0 | 51.0 | 15.0 | 10.0 | 3.0 | 86.0 | 15.0 | 43.0 | 3.0 | 70.0 | 22.0 | 53.0 | 3.0 |
02 | 0.0 | 0.0 | 0.0 | 245.0 | 0.0 | 0.0 | 0.0 | 63.0 | 0.0 | 0.0 | 0.0 | 150.0 | 0.0 | 0.0 | 0.0 | 9.0 |
03 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 17.0 | 450.0 |
04 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 8.0 | 0.0 | 1.0 | 8.0 | 46.0 | 0.0 | 354.0 | 50.0 |
05 | 0.0 | 54.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 353.0 | 1.0 | 0.0 | 0.0 | 58.0 | 0.0 | 0.0 |
06 | 0.0 | 0.0 | 1.0 | 0.0 | 423.0 | 5.0 | 34.0 | 3.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
07 | 10.0 | 5.0 | 4.0 | 404.0 | 0.0 | 0.0 | 0.0 | 6.0 | 0.0 | 2.0 | 0.0 | 33.0 | 0.0 | 0.0 | 0.0 | 3.0 |
08 | 1.0 | 9.0 | 0.0 | 0.0 | 0.0 | 7.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 0.0 | 9.0 | 436.0 | 0.0 | 1.0 |
09 | 9.0 | 0.0 | 1.0 | 0.0 | 454.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
10 | 7.0 | 59.0 | 186.0 | 212.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
11 | 1.0 | 4.0 | 1.0 | 2.0 | 13.0 | 28.0 | 3.0 | 16.0 | 62.0 | 82.0 | 15.0 | 27.0 | 34.0 | 80.0 | 50.0 | 49.0 |
12 | 26.0 | 37.0 | 16.0 | 31.0 | 26.0 | 85.0 | 8.0 | 75.0 | 13.0 | 28.0 | 11.0 | 17.0 | 6.0 | 37.0 | 16.0 | 35.0 |
13 | 15.0 | 15.0 | 27.0 | 14.0 | 67.0 | 48.0 | 13.0 | 59.0 | 17.0 | 13.0 | 10.0 | 11.0 | 24.0 | 44.0 | 38.0 | 52.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.261 | -0.955 | 0.406 | -4.344 | 0.553 | -0.653 | -1.047 | -2.168 | 1.072 | -0.653 | 0.383 | -2.168 | 0.867 | -0.278 | 0.591 | -2.168 |
02 | -4.344 | -4.344 | -4.344 | 2.116 | -4.344 | -4.344 | -4.344 | 0.762 | -4.344 | -4.344 | -4.344 | 1.626 | -4.344 | -4.344 | -4.344 | -1.148 |
03 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -0.531 | 2.723 |
04 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -1.26 | -4.344 | -3.062 | -1.26 | 0.45 | -4.344 | 2.484 | 0.533 |
05 | -4.344 | 0.609 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -3.062 | 2.481 | -3.062 | -4.344 | -4.344 | 0.68 | -4.344 | -4.344 |
06 | -4.344 | -4.344 | -3.062 | -4.344 | 2.661 | -1.703 | 0.151 | -2.168 | -4.344 | -3.062 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 |
07 | -1.047 | -1.703 | -1.909 | 2.616 | -4.344 | -4.344 | -4.344 | -1.533 | -4.344 | -2.518 | -4.344 | 0.121 | -4.344 | -4.344 | -4.344 | -2.168 |
08 | -3.062 | -1.148 | -4.344 | -4.344 | -4.344 | -1.387 | -4.344 | -4.344 | -4.344 | -1.909 | -4.344 | -4.344 | -1.148 | 2.692 | -4.344 | -3.062 |
09 | -1.148 | -4.344 | -3.062 | -4.344 | 2.732 | -4.344 | -3.062 | -3.062 | -4.344 | -4.344 | -4.344 | -4.344 | -3.062 | -4.344 | -4.344 | -4.344 |
10 | -1.387 | 0.697 | 1.841 | 1.972 | -4.344 | -4.344 | -4.344 | -4.344 | -4.344 | -3.062 | -4.344 | -3.062 | -3.062 | -4.344 | -4.344 | -4.344 |
11 | -3.062 | -1.909 | -3.062 | -2.518 | -0.793 | -0.041 | -2.168 | -0.591 | 0.746 | 1.025 | -0.653 | -0.077 | 0.151 | 1.0 | 0.533 | 0.513 |
12 | -0.114 | 0.234 | -0.591 | 0.059 | -0.114 | 1.06 | -1.26 | 0.936 | -0.793 | -0.041 | -0.955 | -0.531 | -1.533 | 0.234 | -0.591 | 0.179 |
13 | -0.653 | -0.653 | -0.077 | -0.721 | 0.824 | 0.492 | -0.793 | 0.697 | -0.531 | -0.793 | -1.047 | -0.955 | -0.193 | 0.406 | 0.261 | 0.572 |