We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCENPB
(GeneCards)
ModelCENPB_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusTTCGYWvnAhRCGGRdh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2219
TF family
TF subfamily
HGNCHGNC:1852
EntrezGeneGeneID:1059
(SSTAR profile)
UniProt IDCENPB_HUMAN
UniProt ACP07199
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.8460900000000002
0.0005 -0.50389
0.0001 2.30651
GTEx tissue expression atlas CENPB expression
ReMap ChIP-seq dataset list CENPB datasets
Motifs in JASPAR
PCM
ACGT
01106.590.597.51924.5
02306.7527.7545.751838.75
0326.752115.7526.7549.75
041.00.02213.05.0
05105.0631.048.01435.0
06960.0204.0106.0949.0
07397.0795.0732.0295.0
08357.0492.0747.0623.0
092198.00.09.012.0
10645.0612.0110.0852.0
11486.0251.01482.00.0
1213.02186.020.00.0
130.01.02218.00.0
1417.53.52193.54.5
15165.0119.01784.0151.0
16750.75262.75288.75916.75
17661.75394.75331.75830.75
PWM
ACGT
01-1.636-1.796-1.7231.241
02-0.59-2.932-2.4581.196
03-2.9661.336-2.966-2.377
04-5.248-5.6661.381-4.387
05-1.650.128-2.4110.948
060.547-0.994-1.6410.535
07-0.3330.3590.276-0.629
08-0.439-0.120.2970.116
091.374-5.666-3.931-3.688
100.150.098-1.6040.428
11-0.132-0.7890.98-5.666
12-3.6191.369-3.234-5.666
13-5.666-5.2481.383-5.666
14-3.355-4.6311.372-4.462
15-1.204-1.5271.166-1.292
160.302-0.743-0.650.501
170.176-0.339-0.5120.403