We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEBF1
(GeneCards)
ModelCOE1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusnnnnnndbYCCCMWGGGRvhnbn
Best auROC (human)0.996
Best auROC (mouse)0.994
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)55
Aligned words506
TF familyEarly B-Cell Factor-related factors {6.1.5}
TF subfamilyEBF1 (COE1) {6.1.5.0.1}
HGNCHGNC:3126
EntrezGeneGeneID:1879
(SSTAR profile)
UniProt IDCOE1_HUMAN
UniProt ACQ9UH73
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.95501
0.0005 7.563510000000001
0.0001 13.41351
GTEx tissue expression atlas EBF1 expression
ReMap ChIP-seq dataset list EBF1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0122.90935.02234.85114.99532.60476.3634.8333.70126.94726.48833.83327.5217.46330.80723.56618.615
029.85134.75729.3315.98530.07773.35611.27253.97420.05523.93338.52914.5628.03529.08240.97516.74
0312.79520.53125.9218.7736.63165.7677.35651.37427.66938.25924.52429.65425.55329.7734.07811.861
0418.90331.54743.7828.41742.36646.5968.95556.41112.73641.56923.90113.6746.52438.32935.2421.565
0519.87111.40938.95410.29675.13625.23311.11546.55739.01722.87930.80419.17721.25318.27935.79624.738
0657.84812.85957.09127.47923.90317.63710.20726.05331.4279.76844.68730.78719.8414.43546.73219.761
0722.88528.76741.08440.2837.94827.877.50711.37412.86836.65883.21425.9765.4823.02357.45218.125
081.8216.5653.72337.0732.0529.7310.0104.5353.62745.9633.802135.8650.033.6115.92656.22
090.07.50.00.00.095.8710.00.00.013.4510.00.00.0333.6920.00.0
100.00.00.00.00.0386.5580.063.9560.00.00.00.00.00.00.00.0
110.00.00.00.01.594380.9230.9063.1340.00.00.00.00.063.9560.00.0
120.01.5940.00.093.228320.9511.04629.6550.00.9060.00.00.02.1980.9360.0
1360.7380.00.032.49178.69911.1254.033131.7921.9820.00.00.028.7970.8580.00.0
140.8890.0268.2121.1160.00.011.9830.00.00.04.0330.00.00.0164.2820.0
150.00.00.8890.00.00.00.00.071.690.0372.5834.2370.00.01.1160.0
160.01.98369.7060.00.00.00.00.01.1791.7371.7080.00.00.04.2370.0
170.00.01.1790.03.6830.00.00.0329.87714.75278.62122.4010.00.00.00.0
1856.243131.441109.95435.9235.2277.4290.02.09712.7553.7959.5353.724.2145.79312.3940.0
198.39427.3279.68533.02941.68472.5657.6476.56831.8346.2737.04816.7342.1339.28512.57217.75
2015.44923.01334.79710.78143.30455.1189.33647.68910.4416.84928.27411.38224.76722.41760.65936.237
2118.74227.64243.6953.88129.17331.75616.51439.95418.08433.1462.92718.9146.33618.62360.73120.4
2217.67731.71915.47.5439.85320.49311.70139.11560.73463.54738.66420.9226.10218.32538.65120.07
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.2030.2160.211-0.6180.1450.989-1.70.178-0.043-0.060.181-0.023-1.2910.089-0.175-0.407
02-1.0260.2080.04-0.5560.0650.949-0.8960.644-0.334-0.160.31-0.647-1.2210.0320.371-0.511
03-0.773-0.311-0.082-1.1370.260.841-1.3050.595-0.0170.303-0.1360.051-0.0960.0550.189-0.846
04-0.3920.1120.437-1.1770.4040.498-1.1170.688-0.7770.385-0.162-0.708-1.4190.3050.222-0.263
05-0.343-0.8840.321-0.9830.973-0.108-0.9090.4980.322-0.2040.089-0.378-0.277-0.4250.237-0.128
060.713-0.7680.7-0.024-0.161-0.46-0.991-0.0770.108-1.0340.4570.088-0.344-0.6550.501-0.348
07-0.2040.0210.3740.354-1.231-0.01-1.286-0.887-0.7670.2611.075-0.08-1.583-0.1980.706-0.433
08-2.562-1.413-1.9390.272-2.462-1.037-4.3141.302-1.9630.485-1.921.563-4.3140.175-1.5090.685
09-4.314-1.287-4.314-4.314-4.3141.216-4.314-4.314-4.314-0.724-4.314-4.314-4.3142.46-4.314-4.314
10-4.314-4.314-4.314-4.314-4.3142.607-4.3140.813-4.314-4.314-4.314-4.314-4.314-4.314-4.314-4.314
11-4.314-4.314-4.314-4.314-2.672.592-3.099-2.094-4.314-4.314-4.314-4.314-4.3140.813-4.314-4.314
12-4.314-2.67-4.314-4.3141.1882.421-2.9950.051-4.314-3.099-4.314-4.314-4.314-2.403-3.075-4.314
130.762-4.314-4.3140.1411.837-0.908-1.8661.533-2.491-4.314-4.314-4.3140.022-3.137-4.314-4.314
14-3.112-4.3142.242-2.947-4.314-4.314-0.836-4.314-4.314-4.314-1.866-4.314-4.314-4.3141.753-4.314
15-4.314-4.314-3.112-4.314-4.314-4.314-4.314-4.3140.926-4.3142.57-1.821-4.314-4.314-2.947-4.314
16-4.314-2.490.898-4.314-4.314-4.314-4.314-4.314-2.906-2.6182.568-4.314-4.314-4.314-1.821-4.314
17-4.314-4.314-2.906-4.314-1.949-4.314-4.314-4.3142.449-0.6341.018-0.225-4.314-4.314-4.314-4.314
180.6851.531.3520.241-1.627-1.296-4.314-2.444-0.7760.641-1.057-1.94-1.826-1.531-0.804-4.314
19-1.179-0.03-1.0420.1580.3880.938-1.2690.9920.1210.4910.271-0.511-2.429-1.083-0.79-0.454
20-0.589-0.1990.209-0.9390.4260.665-1.0770.521-0.97-0.5050.004-0.886-0.126-0.2250.760.249
21-0.4-0.0180.435-1.9010.0350.119-0.5240.346-0.4350.1610.797-0.391-1.446-0.4070.761-0.317
22-0.4580.118-0.592-1.2820.343-0.313-0.8590.3250.7610.8070.313-0.292-1.482-0.4220.313-0.333