We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorNR2F2
(GeneCards)
ModelCOT2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnddbnvMRAGGTCAvvdn
Best auROC (human)0.948
Best auROC (mouse)0.834
Peak sets in benchmark (human)28
Peak sets in benchmark (mouse)3
Aligned words505
TF familyRXR-related receptors (NR2) {2.1.3}
TF subfamilyCOUP-like receptors (NR2F) {2.1.3.5}
HGNCHGNC:7976
EntrezGeneGeneID:7026
(SSTAR profile)
UniProt IDCOT2_HUMAN
UniProt ACP24468
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.431910000000002
0.0005 11.46846
0.0001 15.522960000000001
GTEx tissue expression atlas NR2F2 expression
ReMap ChIP-seq dataset list NR2F2 datasets
Motifs in JASPAR
MA1111.1 (NR2F2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0143.014.090.022.039.014.07.032.054.012.048.025.023.07.050.020.0
0230.016.095.018.026.06.03.012.047.026.098.024.021.012.044.022.0
0318.030.056.020.014.026.09.011.038.026.0134.042.08.019.027.022.0
0415.014.027.022.032.044.09.016.021.060.088.057.015.046.020.014.0
0526.038.012.07.049.090.03.022.019.081.026.018.08.068.020.013.0
0657.016.022.07.0222.029.04.022.043.04.08.06.031.05.018.06.0
07159.031.0151.012.041.010.03.00.023.02.026.01.011.07.021.02.0
08185.00.044.05.045.02.01.02.0146.01.051.03.011.00.04.00.0
093.00.0377.07.01.00.02.00.00.00.0100.00.01.00.09.00.0
100.00.05.00.00.00.00.00.02.01.0450.035.00.00.07.00.0
110.00.00.02.00.00.00.01.01.026.033.0402.01.03.02.029.0
120.02.00.00.01.028.00.00.00.033.00.02.01.0410.05.018.0
132.00.00.00.0467.01.00.05.05.00.00.00.020.00.00.00.0
14143.090.0204.057.01.00.00.00.00.00.00.00.00.01.04.00.0
1536.08.084.016.044.013.012.022.083.044.065.016.05.013.031.08.0
1630.014.0104.020.038.011.014.015.037.015.0107.033.09.09.028.016.0
1739.018.046.011.013.014.03.019.062.059.078.054.016.015.021.032.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.316-0.7881.05-0.3460.219-0.788-1.4540.0230.542-0.9380.425-0.22-0.302-1.4540.465-0.439
02-0.04-0.6581.104-0.543-0.181-1.6-2.234-0.9380.404-0.1811.135-0.26-0.392-0.9380.339-0.346
03-0.543-0.040.578-0.439-0.788-0.181-1.215-1.0220.193-0.1811.4460.293-1.328-0.49-0.144-0.346
04-0.721-0.788-0.144-0.3460.0230.339-1.215-0.658-0.3920.6461.0270.595-0.7210.383-0.439-0.788
05-0.1810.193-0.938-1.4540.4451.05-2.234-0.346-0.490.945-0.181-0.543-1.3280.771-0.439-0.86
060.595-0.658-0.346-1.4541.95-0.074-1.975-0.3460.316-1.975-1.328-1.6-0.008-1.77-0.543-1.6
071.617-0.0081.565-0.9380.269-1.114-2.234-4.4-0.302-2.584-0.181-3.126-1.022-1.454-0.392-2.584
081.768-4.40.339-1.770.361-2.584-3.126-2.5841.532-3.1260.485-2.234-1.022-4.4-1.975-4.4
09-2.234-4.42.479-1.454-3.126-4.4-2.584-4.4-4.4-4.41.155-4.4-3.126-4.4-1.215-4.4
10-4.4-4.4-1.77-4.4-4.4-4.4-4.4-4.4-2.584-3.1262.6560.112-4.4-4.4-1.454-4.4
11-4.4-4.4-4.4-2.584-4.4-4.4-4.4-3.126-3.126-0.1810.0542.543-3.126-2.234-2.584-0.074
12-4.4-2.584-4.4-4.4-3.126-0.108-4.4-4.4-4.40.054-4.4-2.584-3.1262.563-1.77-0.543
13-2.584-4.4-4.4-4.42.693-3.126-4.4-1.77-1.77-4.4-4.4-4.4-0.439-4.4-4.4-4.4
141.5111.051.8660.595-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-1.975-4.4
150.14-1.3280.981-0.6580.339-0.86-0.938-0.3460.9690.3390.726-0.658-1.77-0.86-0.008-1.328
16-0.04-0.7881.194-0.4390.193-1.022-0.788-0.7210.167-0.7211.2220.054-1.215-1.215-0.108-0.658
170.219-0.5430.383-1.022-0.86-0.788-2.234-0.490.6790.630.9070.542-0.658-0.721-0.3920.023