We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCPEB1
(GeneCards)
ModelCPEB1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensushTTTTATYhYYYYWWWh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1803
TF family
TF subfamily
HGNCHGNC:21744
EntrezGeneGeneID:64506
(SSTAR profile)
UniProt IDCPEB1_HUMAN
UniProt ACQ9BZB8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.77611
0.0005 5.26266
0.0001 8.366710000000001
GTEx tissue expression atlas CPEB1 expression
ReMap ChIP-seq dataset list CPEB1 datasets
Motifs in JASPAR
PCM
ACGT
01295.0393.0161.0954.0
021.01.01.01800.0
038.56.50.51787.5
041.253.250.251798.25
050.03.00.01800.0
061797.01.04.01.0
074.098.06.01695.0
08231.0425.051.01096.0
09328.0452.0132.0891.0
10167.0403.087.01146.0
11146.0332.062.01263.0
12118.0245.047.01393.0
13181.0213.029.01380.0
14326.75178.7520.751276.75
15404.0210.042.01147.0
16433.25304.2562.251003.25
17403.25379.25126.25894.25
PWM
ACGT
01-0.422-0.136-1.0220.748
02-5.059-5.059-5.0591.382
03-3.776-3.99-5.251.375
04-4.976-4.481-5.3621.381
05-5.487-4.531-5.4871.382
061.38-5.059-4.344-5.059
07-4.344-1.511-4.0511.321
08-0.665-0.059-2.1470.886
09-0.3160.003-1.2180.679
10-0.986-0.111-1.6280.931
11-1.119-0.304-1.9581.028
12-1.329-0.606-2.2261.125
13-0.906-0.745-2.6851.116
14-0.32-0.919-2.9961.038
15-0.109-0.759-2.3340.931
16-0.039-0.391-1.9540.798
17-0.111-0.172-1.2620.683