We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCREB3L1
(GeneCards)
ModelCR3L1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusKMCACGTGGCA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words39883
TF familyCREB-related factors {1.1.7}
TF subfamilyCREB-3-like factors {1.1.7.2}
HGNCHGNC:18856
EntrezGeneGeneID:90993
(SSTAR profile)
UniProt IDCR3L1_HUMAN
UniProt ACQ96BA8
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -8.41383
0.0005 -6.59264
0.0001 -0.8315299999999999
GTEx tissue expression atlas CREB3L1 expression
ReMap ChIP-seq dataset list CREB3L1 datasets
Motifs in JASPAR
PCM
ACGT
012214.6352359.35721260.0575147.469
028228.28718001.788105.2834646.16
03872.48224423.5954940.436745.004
0430981.5180.00.00.0
050.030981.5180.00.0
060.00.030981.5180.0
070.00.00.030981.518
080.00.030981.5180.0
090.00.030981.5180.0
100.030981.5180.00.0
1130439.499180.673180.673180.673
PWM
ACGT
01-1.251-1.1881.01-0.408
020.060.843-4.274-0.511
03-2.1811.148-0.449-2.338
041.386-8.005-8.005-8.005
05-8.0051.386-8.005-8.005
06-8.005-8.0051.386-8.005
07-8.005-8.005-8.0051.386
08-8.005-8.0051.386-8.005
09-8.005-8.0051.386-8.005
10-8.0051.386-8.005-8.005
111.368-3.744-3.744-3.744