We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCREB3L2
(GeneCards)
ModelCR3L2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusYKvWSACGTGdnv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1223
TF familyCREB-related factors {1.1.7}
TF subfamilyCREB-3-like factors {1.1.7.2}
HGNCHGNC:23720
EntrezGeneGeneID:64764
(SSTAR profile)
UniProt IDCR3L2_HUMAN
UniProt ACQ70SY1
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.44321
0.0005 2.5145099999999996
0.0001 4.72487
GTEx tissue expression atlas CREB3L2 expression
ReMap ChIP-seq dataset list CREB3L2 datasets
Motifs in JASPAR
PCM
ACGT
01133.0183.0124.0779.0
02106.25101.25882.25129.25
03525.0226.0257.0211.0
04160.099.030.0930.0
054.25265.25884.2565.25
061210.251.253.254.25
073.01206.06.04.0
080.02.01215.02.0
092.54.54.51207.5
105.510.51198.54.5
11164.0154.0717.0184.0
12165.0729.0160.0165.0
13660.75174.75215.75167.75
PWM
ACGT
01-0.822-0.506-0.8910.935
02-1.043-1.091.059-0.85
030.541-0.297-0.169-0.365
04-0.639-1.112-2.2671.112
05-3.929-0.1381.061-1.52
061.375-4.618-4.111-3.929
07-4.1621.371-3.674-3.972
08-5.151-4.3971.379-4.397
09-4.272-3.889-3.8891.372
10-3.741-3.2181.365-3.889
11-0.615-0.6770.852-0.501
12-0.6090.869-0.639-0.609
130.771-0.552-0.343-0.592