We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCREB3
(GeneCards)
ModelCREB3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length13
Quality
D
Motif rank
0
ConsensusbnRTGACGTGKMd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words95
TF familyCREB-related factors {1.1.7}
TF subfamilyCREB-3-like factors {1.1.7.2}
HGNCHGNC:2347
EntrezGeneGeneID:10488
(SSTAR profile)
UniProt IDCREB3_HUMAN
UniProt ACO43889
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.728175
0.0005 2.7835650000000003
0.0001 5.0398499999999995
GTEx tissue expression atlas CREB3 expression
ReMap ChIP-seq dataset list CREB3 datasets
Motifs in JASPAR
PCM
ACGT
0110.7518.7522.7540.75
0213.2512.2554.2513.25
0345.250.2547.250.25
041.00.00.092.0
050.01.092.00.0
0693.00.00.00.0
070.093.00.00.0
080.00.093.00.0
090.00.00.093.0
101.758.7581.750.75
118.750.7567.7515.75
1221.2564.251.256.25
1348.012.019.014.0
PWM
ACGT
01-0.719-0.204-0.0210.541
02-0.528-0.60.82-0.528
030.643-2.870.685-2.87
04-2.436-3.069-3.0691.34
05-3.069-2.4361.34-3.069
061.351-3.069-3.069-3.069
07-3.0691.351-3.069-3.069
08-3.069-3.0691.351-3.069
09-3.069-3.069-3.0691.351
10-2.135-0.9031.224-2.561
11-0.903-2.5611.039-0.368
12-0.0860.986-2.325-1.195
130.701-0.619-0.192-0.477