Transcription factor | CREB3 (GeneCards) | ||||||||
Model | CREB3_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | HT-SELEX | ||||||||
Model release | HOCOMOCOv10 | ||||||||
Model length | 13 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | bnRTGACGTGKMd | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 95 | ||||||||
TF family | CREB-related factors {1.1.7} | ||||||||
TF subfamily | CREB-3-like factors {1.1.7.2} | ||||||||
HGNC | HGNC:2347 | ||||||||
EntrezGene | GeneID:10488 (SSTAR profile) | ||||||||
UniProt ID | CREB3_HUMAN | ||||||||
UniProt AC | O43889 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | CREB3 expression | ||||||||
ReMap ChIP-seq dataset list | CREB3 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 10.75 | 18.75 | 22.75 | 40.75 |
02 | 13.25 | 12.25 | 54.25 | 13.25 |
03 | 45.25 | 0.25 | 47.25 | 0.25 |
04 | 1.0 | 0.0 | 0.0 | 92.0 |
05 | 0.0 | 1.0 | 92.0 | 0.0 |
06 | 93.0 | 0.0 | 0.0 | 0.0 |
07 | 0.0 | 93.0 | 0.0 | 0.0 |
08 | 0.0 | 0.0 | 93.0 | 0.0 |
09 | 0.0 | 0.0 | 0.0 | 93.0 |
10 | 1.75 | 8.75 | 81.75 | 0.75 |
11 | 8.75 | 0.75 | 67.75 | 15.75 |
12 | 21.25 | 64.25 | 1.25 | 6.25 |
13 | 48.0 | 12.0 | 19.0 | 14.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.719 | -0.204 | -0.021 | 0.541 |
02 | -0.528 | -0.6 | 0.82 | -0.528 |
03 | 0.643 | -2.87 | 0.685 | -2.87 |
04 | -2.436 | -3.069 | -3.069 | 1.34 |
05 | -3.069 | -2.436 | 1.34 | -3.069 |
06 | 1.351 | -3.069 | -3.069 | -3.069 |
07 | -3.069 | 1.351 | -3.069 | -3.069 |
08 | -3.069 | -3.069 | 1.351 | -3.069 |
09 | -3.069 | -3.069 | -3.069 | 1.351 |
10 | -2.135 | -0.903 | 1.224 | -2.561 |
11 | -0.903 | -2.561 | 1.039 | -0.368 |
12 | -0.086 | 0.986 | -2.325 | -1.195 |
13 | 0.701 | -0.619 | -0.192 | -0.477 |