We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCREM
(GeneCards)
ModelCREM_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
C
Motif rank
0
ConsensusSRvTGACGTSA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words30
TF familyCREB-related factors {1.1.7}
TF subfamilyCREB-like factors {1.1.7.1}
HGNCHGNC:2352
EntrezGeneGeneID:1390
(SSTAR profile)
UniProt IDCREM_HUMAN
UniProt ACQ03060
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.25071
0.0005 5.021565000000001
0.0001 6.6308050000000005
GTEx tissue expression atlas CREM expression
ReMap ChIP-seq dataset list CREM datasets
Motifs in JASPAR
PCM
ACGT
011.2717.2567.8383.872
0214.0036.329.9140.0
037.80712.2687.9312.231
040.00.00.030.236
050.9910.029.2450.0
0629.1211.1150.00.0
070.99127.2621.9830.0
086.5680.023.6690.0
093.2220.9910.026.023
100.86721.3146.8161.239
1125.4033.0980.9910.744
PWM
ACGT
01-1.3770.7670.033-0.577
020.569-0.1590.247-2.289
030.0290.4450.043-1.004
04-2.289-2.289-2.2891.307
05-1.518-2.2891.275-2.289
061.271-1.453-2.289-2.289
07-1.5181.207-1.088-2.289
08-0.125-2.2891.07-2.289
09-0.725-1.518-2.2891.162
10-1.5870.969-0.093-1.392
111.138-0.756-1.518-1.662