CREM_HUMAN.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

CREM
(GeneCards)

Model

CREM_HUMAN.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

11

Quality

C

Motif rank

0

Consensus

SRvTGACGTSA

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

30

TF family

CREB-related factors {1.1.7}

TF subfamily

CREB-like factors {1.1.7.1}

HGNC

EntrezGene

GeneID:1390
(SSTAR profile)

UniProt ID

UniProt AC

Q03060
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	4.25071
0.0005	5.021565000000001
0.0001	6.6308050000000005

GTEx tissue expression atlas

CREM expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0609.1 (Crem; Mus musculus)

PCM

	A	C	G	T
01	1.27	17.256	7.838	3.872
02	14.003	6.32	9.914	0.0
03	7.807	12.268	7.931	2.231
04	0.0	0.0	0.0	30.236
05	0.991	0.0	29.245	0.0
06	29.121	1.115	0.0	0.0
07	0.991	27.262	1.983	0.0
08	6.568	0.0	23.669	0.0
09	3.222	0.991	0.0	26.023
10	0.867	21.314	6.816	1.239
11	25.403	3.098	0.991	0.744

PWM

	A	C	G	T
01	-1.377	0.767	0.033	-0.577
02	0.569	-0.159	0.247	-2.289
03	0.029	0.445	0.043	-1.004
04	-2.289	-2.289	-2.289	1.307
05	-1.518	-2.289	1.275	-2.289
06	1.271	-1.453	-2.289	-2.289
07	-1.518	1.207	-1.088	-2.289
08	-0.125	-2.289	1.07	-2.289
09	-0.725	-1.518	-2.289	1.162
10	-1.587	0.969	-0.093	-1.392
11	1.138	-0.756	-1.518	-1.662