Model info
| Transcription factor | CREM (GeneCards) | ||||||||
| Model | CREM_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | SRvTGACGTSA | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 30 | ||||||||
| TF family | CREB-related factors {1.1.7} | ||||||||
| TF subfamily | CREB-like factors {1.1.7.1} | ||||||||
| HGNC | HGNC:2352 | ||||||||
| EntrezGene | GeneID:1390 (SSTAR profile) | ||||||||
| UniProt ID | CREM_HUMAN | ||||||||
| UniProt AC | Q03060 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | CREM expression | ||||||||
| ReMap ChIP-seq dataset list | CREM datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.27 | 17.256 | 7.838 | 3.872 |
| 02 | 14.003 | 6.32 | 9.914 | 0.0 |
| 03 | 7.807 | 12.268 | 7.931 | 2.231 |
| 04 | 0.0 | 0.0 | 0.0 | 30.236 |
| 05 | 0.991 | 0.0 | 29.245 | 0.0 |
| 06 | 29.121 | 1.115 | 0.0 | 0.0 |
| 07 | 0.991 | 27.262 | 1.983 | 0.0 |
| 08 | 6.568 | 0.0 | 23.669 | 0.0 |
| 09 | 3.222 | 0.991 | 0.0 | 26.023 |
| 10 | 0.867 | 21.314 | 6.816 | 1.239 |
| 11 | 25.403 | 3.098 | 0.991 | 0.744 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.377 | 0.767 | 0.033 | -0.577 |
| 02 | 0.569 | -0.159 | 0.247 | -2.289 |
| 03 | 0.029 | 0.445 | 0.043 | -1.004 |
| 04 | -2.289 | -2.289 | -2.289 | 1.307 |
| 05 | -1.518 | -2.289 | 1.275 | -2.289 |
| 06 | 1.271 | -1.453 | -2.289 | -2.289 |
| 07 | -1.518 | 1.207 | -1.088 | -2.289 |
| 08 | -0.125 | -2.289 | 1.07 | -2.289 |
| 09 | -0.725 | -1.518 | -2.289 | 1.162 |
| 10 | -1.587 | 0.969 | -0.093 | -1.392 |
| 11 | 1.138 | -0.756 | -1.518 | -1.662 |