We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCrx
ModelCRX_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnvddvRGATTAdn
Best auROC (human)
Best auROC (mouse)0.946
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)8
Aligned words501
TF familyPaired-related HD factors {3.1.3}
TF subfamilyOTX {3.1.3.17}
MGIMGI:1194883
EntrezGeneGeneID:12951
(SSTAR profile)
UniProt IDCRX_MOUSE
UniProt ACO54751
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.04311
0.0005 12.124120000000001
0.0001 15.764454999999998
GTEx tissue expression atlas Crx expression
Motifs in JASPAR
MA0467.1 (Crx; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0162.017.046.013.038.028.010.016.030.018.032.011.0102.023.040.014.0
02160.08.057.07.036.011.06.033.062.018.028.020.015.015.020.04.0
0350.015.0162.046.025.08.04.015.040.015.047.09.07.011.044.02.0
0422.014.074.012.026.013.06.04.0123.053.066.015.019.018.029.06.0
0527.01.0161.01.045.07.045.01.063.06.0104.02.03.00.034.00.0
060.00.0138.00.01.00.012.01.05.04.0335.00.00.00.04.00.0
076.00.00.00.04.00.00.00.0401.087.01.00.01.00.00.00.0
080.01.00.0411.00.00.00.087.00.00.00.01.00.00.00.00.0
090.00.00.00.00.00.00.01.00.00.00.00.010.012.01.0476.0
1010.00.00.00.012.00.00.00.01.00.00.00.0444.03.010.020.0
11127.053.0197.090.03.00.00.00.05.02.00.03.06.03.011.00.0
1242.022.064.013.027.014.05.012.042.079.052.035.024.038.024.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.679-0.5990.383-0.860.193-0.108-1.114-0.658-0.04-0.5430.023-1.0221.174-0.3020.244-0.788
021.623-1.3280.595-1.4540.14-1.022-1.60.0540.679-0.543-0.108-0.439-0.721-0.721-0.439-1.975
030.465-0.7211.6360.383-0.22-1.328-1.975-0.7210.244-0.7210.404-1.215-1.454-1.0220.339-2.584
04-0.346-0.7880.855-0.938-0.181-0.86-1.6-1.9751.3610.5230.741-0.721-0.49-0.543-0.074-1.6
05-0.144-3.1261.629-3.1260.361-1.4540.361-3.1260.695-1.61.194-2.584-2.234-4.40.083-4.4
06-4.4-4.41.476-4.4-3.126-4.4-0.938-3.126-1.77-1.9752.361-4.4-4.4-4.4-1.975-4.4
07-1.6-4.4-4.4-4.4-1.975-4.4-4.4-4.42.5411.016-3.126-4.4-3.126-4.4-4.4-4.4
08-4.4-3.126-4.42.565-4.4-4.4-4.41.016-4.4-4.4-4.4-3.126-4.4-4.4-4.4-4.4
09-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-4.4-1.114-0.938-3.1262.712
10-1.114-4.4-4.4-4.4-0.938-4.4-4.4-4.4-3.126-4.4-4.4-4.42.642-2.234-1.114-0.439
111.3930.5231.8311.05-2.234-4.4-4.4-4.4-1.77-2.584-4.4-2.234-1.6-2.234-1.022-4.4
120.293-0.3460.711-0.86-0.144-0.788-1.77-0.9380.2930.920.5040.112-0.260.193-0.26-1.454