We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCrx
ModelCRX_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensushvRdvGGATTAdv
Best auROC (human)
Best auROC (mouse)0.933
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)8
Aligned words500
TF familyPaired-related HD factors {3.1.3}
TF subfamilyOTX {3.1.3.17}
MGIMGI:1194883
EntrezGeneGeneID:12951
(SSTAR profile)
UniProt IDCRX_MOUSE
UniProt ACO54751
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.28486
0.0005 6.12191
0.0001 7.818065000000001
GTEx tissue expression atlas Crx expression
Motifs in JASPAR
MA0467.1 (Crx; Mus musculus)
PCM
ACGT
01124.082.076.0218.0
02267.052.0131.050.0
03287.023.0138.052.0
0486.046.0283.085.0
05249.082.0131.038.0
0696.03.0388.013.0
0716.05.0468.011.0
08382.0109.08.01.0
090.00.00.0500.0
1011.029.012.0448.0
11440.02.017.041.0
12135.033.0263.069.0
13117.0162.0172.049.0
PWM
ACGT
01-0.008-0.415-0.490.551
020.752-0.860.046-0.898
030.824-1.640.098-0.86
04-0.368-0.9790.81-0.38
050.683-0.4150.046-1.163
06-0.26-3.3251.124-2.163
07-1.975-2.9611.311-2.311
081.109-0.135-2.584-3.903
09-4.4-4.4-4.41.377
10-2.311-1.421-2.2341.268
111.25-3.573-1.92-1.09
120.076-1.2980.737-0.584
13-0.0650.2560.316-0.918