We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorCtcf
ModelCTCF_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
A
Motif rank
0
ConsensusnbbRCCRSYAGGKGGCGSbvbnb
Best auROC (human)0.999
Best auROC (mouse)1.0
Peak sets in benchmark (human)502
Peak sets in benchmark (mouse)263
Aligned words495
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyCTCF-like factors {2.3.3.50}
MGIMGI:109447
EntrezGeneGeneID:13018
(SSTAR profile)
UniProt IDCTCF_MOUSE
UniProt ACQ61164
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -1.62924
0.0005 1.04461
0.0001 6.776660000000001
GTEx tissue expression atlas Ctcf expression
Motifs in JASPAR
MA0139.1 (CTCF; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0110.029.014.045.05.046.019.061.021.062.017.072.03.046.013.032.0
023.05.026.05.039.041.065.038.012.016.022.013.017.028.0148.017.0
0313.05.048.05.031.05.047.07.044.030.0151.036.017.02.047.07.0
045.093.06.01.02.034.02.04.014.0252.015.012.00.054.00.01.0
050.020.00.01.04.0429.00.00.01.022.00.00.00.018.00.00.0
060.02.03.00.0317.09.0134.029.00.00.00.00.00.01.00.00.0
073.0197.0115.02.03.02.06.01.04.089.042.02.00.013.015.01.0
081.06.01.02.045.0154.013.089.08.0143.06.021.00.01.02.03.0
0930.014.06.04.0299.00.02.03.017.02.01.02.097.01.013.04.0
101.00.0441.01.00.00.017.00.01.00.021.00.00.00.013.00.0
110.00.02.00.00.00.00.00.0171.00.0320.01.00.00.01.00.0
122.02.0126.041.00.00.00.00.014.014.0192.0103.00.00.01.00.0
130.00.015.01.00.00.016.00.02.01.0313.03.00.00.0144.00.0
140.01.01.00.00.00.00.01.012.010.0438.028.00.00.04.00.0
150.011.00.01.02.08.01.00.029.0398.00.016.00.029.00.00.0
162.00.028.01.0125.02.0318.01.00.01.00.00.00.01.016.00.0
173.025.098.01.00.02.01.01.027.0307.020.08.00.01.01.00.0
183.015.03.09.029.088.037.0181.09.073.012.026.01.06.03.00.0
194.019.015.04.0103.044.026.09.06.038.07.04.029.053.0130.04.0
2014.017.082.029.023.024.067.040.06.072.022.078.01.08.09.03.0
2110.012.018.04.038.020.029.034.074.049.032.025.022.028.062.038.0
2215.019.099.011.016.024.049.020.022.028.074.017.03.022.065.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.104-0.064-0.7780.371-1.760.393-0.480.673-0.3820.689-0.5890.838-2.2240.393-0.850.033
02-2.224-1.76-0.172-1.760.2290.2790.7360.203-0.928-0.648-0.336-0.85-0.589-0.0981.555-0.589
03-0.85-1.760.435-1.760.002-1.760.414-1.4450.349-0.031.5750.15-0.589-2.5740.414-1.445
04-1.761.092-1.59-3.117-2.5740.093-2.574-1.966-0.7782.087-0.711-0.928-4.3920.552-4.392-3.117
05-4.392-0.429-4.392-3.117-1.9662.618-4.392-4.392-3.117-0.336-4.392-4.392-4.392-0.533-4.392-4.392
06-4.392-2.574-2.224-4.3922.316-1.2051.456-0.064-4.392-4.392-4.392-4.392-4.392-3.117-4.392-4.392
07-2.2241.8411.304-2.574-2.224-2.574-1.59-3.117-1.9661.0490.302-2.574-4.392-0.85-0.711-3.117
08-3.117-1.59-3.117-2.5740.3711.595-0.851.049-1.3181.521-1.59-0.382-4.392-3.117-2.574-2.224
09-0.03-0.778-1.59-1.9662.257-4.392-2.574-2.224-0.589-2.574-3.117-2.5741.134-3.117-0.85-1.966
10-3.117-4.3922.645-3.117-4.392-4.392-0.589-4.392-3.117-4.392-0.382-4.392-4.392-4.392-0.85-4.392
11-4.392-4.392-2.574-4.392-4.392-4.392-4.392-4.3921.7-4.3922.325-3.117-4.392-4.392-3.117-4.392
12-2.574-2.5741.3950.279-4.392-4.392-4.392-4.392-0.778-0.7781.8151.194-4.392-4.392-3.117-4.392
13-4.392-4.392-0.711-3.117-4.392-4.392-0.648-4.392-2.574-3.1172.303-2.224-4.392-4.3921.528-4.392
14-4.392-3.117-3.117-4.392-4.392-4.392-4.392-3.117-0.928-1.1042.639-0.098-4.392-4.392-1.966-4.392
15-4.392-1.012-4.392-3.117-2.574-1.318-3.117-4.392-0.0642.543-4.392-0.648-4.392-0.064-4.392-4.392
16-2.574-4.392-0.098-3.1171.387-2.5742.319-3.117-4.392-3.117-4.392-4.392-4.392-3.117-0.648-4.392
17-2.224-0.211.144-3.117-4.392-2.574-3.117-3.117-0.1342.284-0.429-1.318-4.392-3.117-3.117-4.392
18-2.224-0.711-2.224-1.205-0.0641.0370.1771.756-1.2050.851-0.928-0.172-3.117-1.59-2.224-4.392
19-1.966-0.48-0.711-1.9661.1940.349-0.172-1.205-1.590.203-1.445-1.966-0.0640.5331.426-1.966
20-0.778-0.5890.967-0.064-0.292-0.250.7660.254-1.590.838-0.3360.917-3.117-1.318-1.205-2.224
21-1.104-0.928-0.533-1.9660.203-0.429-0.0640.0930.8650.4550.033-0.21-0.336-0.0980.6890.203
22-0.711-0.481.155-1.012-0.648-0.250.455-0.429-0.336-0.0980.865-0.589-2.224-0.3360.736-1.012