DBP_HUMAN.H11MO.0.B motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

DBP
(GeneCards)

Model

DBP_HUMAN.H11MO.0.B

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

11

Quality

B

Motif rank

0

Consensus

vTKRYGTAAbv

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

26

TF family

C/EBP-related {1.1.8}

TF subfamily

PAR factors {1.1.8.2}

HGNC

EntrezGene

GeneID:1628
(SSTAR profile)

UniProt ID

UniProt AC

Q10586
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	5.302015
0.0005	5.981545
0.0001	7.21157

GTEx tissue expression atlas

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0639.1 (DBP; Homo sapiens)

PCM

	A	C	G	T
01	7.799	5.753	10.74	0.639
02	1.79	0.0	1.151	21.991
03	2.301	1.151	2.429	19.05
04	15.982	1.918	4.091	2.941
05	0.639	3.26	2.301	18.731
06	2.301	0.0	21.352	1.279
07	0.0	11.379	0.0	13.553
08	22.502	1.279	0.0	1.151
09	23.781	0.0	0.0	1.151
10	2.237	8.247	6.457	7.991
11	9.845	6.137	4.603	4.347

PWM

	A	C	G	T
01	0.201	-0.071	0.495	-1.584
02	-0.998	-2.169	-1.281	1.175
03	-0.818	-1.281	-0.778	1.037
04	0.869	-0.95	-0.363	-0.631
05	-1.584	-0.549	-0.818	1.021
06	-0.818	-2.169	1.147	-1.218
07	-2.169	0.549	-2.169	0.713
08	1.198	-1.218	-2.169	-1.281
09	1.251	-2.169	-2.169	-1.281
10	-0.839	0.252	0.031	0.223
11	0.414	-0.014	-0.264	-0.312