We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorDDIT3
(GeneCards)
ModelDDIT3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
D
Motif rank
0
ConsensusMTGATGMAAb
Best auROC (human)0.628
Best auROC (mouse)0.91
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)6
Aligned words500
TF familyC/EBP-related {1.1.8}
TF subfamilyC/EBP {1.1.8.1}
HGNCHGNC:2726
EntrezGeneGeneID:1649
(SSTAR profile)
UniProt IDDDIT3_HUMAN
UniProt ACP35638
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.954185
0.0005 6.030145
0.0001 7.652005
GTEx tissue expression atlas DDIT3 expression
ReMap ChIP-seq dataset list DDIT3 datasets
Motifs in JASPAR
MA0019.1 (Ddit3::Cebpa; Rattus norvegicus)
PCM
ACGT
01218.0200.073.09.0
0211.09.08.0472.0
036.014.0465.015.0
04450.014.016.020.0
0511.029.023.0437.0
067.04.0476.013.0
07168.0216.02.0114.0
08442.056.02.00.0
09494.00.04.02.0
1036.0121.082.0261.0
PWM
ACGT
010.5510.465-0.529-2.484
02-2.311-2.484-2.5841.32
03-2.819-2.0961.305-2.034
041.272-2.096-1.975-1.77
05-2.311-1.421-1.641.243
06-2.694-3.1261.328-2.163
070.2930.542-3.573-0.091
081.254-0.788-3.573-4.4
091.365-4.4-3.126-3.573
10-1.215-0.032-0.4150.73