Model info
| Transcription factor | DUX4 (GeneCards) | ||||||||
| Model | DUX4_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TGATTRRRTTA | ||||||||
| Best auROC (human) | 0.996 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 5 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Paired-related HD factors {3.1.3} | ||||||||
| TF subfamily | DUX {3.1.3.7} | ||||||||
| HGNC | HGNC:50800 | ||||||||
| EntrezGene | GeneID:100288687 (SSTAR profile) | ||||||||
| UniProt ID | DUX4_HUMAN | ||||||||
| UniProt AC | Q9UBX2 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | DUX4 expression | ||||||||
| ReMap ChIP-seq dataset list | DUX4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 13.0 | 0.0 | 1.0 | 486.0 |
| 02 | 6.0 | 0.0 | 494.0 | 0.0 |
| 03 | 500.0 | 0.0 | 0.0 | 0.0 |
| 04 | 1.0 | 0.0 | 1.0 | 498.0 |
| 05 | 1.0 | 1.0 | 4.0 | 494.0 |
| 06 | 350.0 | 29.0 | 120.0 | 1.0 |
| 07 | 144.0 | 55.0 | 300.0 | 1.0 |
| 08 | 196.0 | 7.0 | 253.0 | 44.0 |
| 09 | 2.0 | 1.0 | 0.0 | 497.0 |
| 10 | 0.0 | 6.0 | 2.0 | 492.0 |
| 11 | 420.0 | 9.0 | 12.0 | 59.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.163 | -4.4 | -3.903 | 1.349 |
| 02 | -2.819 | -4.4 | 1.365 | -4.4 |
| 03 | 1.377 | -4.4 | -4.4 | -4.4 |
| 04 | -3.903 | -4.4 | -3.903 | 1.373 |
| 05 | -3.903 | -3.903 | -3.126 | 1.365 |
| 06 | 1.022 | -1.421 | -0.04 | -3.903 |
| 07 | 0.14 | -0.805 | 0.868 | -3.903 |
| 08 | 0.445 | -2.694 | 0.699 | -1.022 |
| 09 | -3.573 | -3.903 | -4.4 | 1.371 |
| 10 | -4.4 | -2.819 | -3.573 | 1.361 |
| 11 | 1.203 | -2.484 | -2.234 | -0.737 |