We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorDUX4
(GeneCards)
ModelDUX4_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusTGATTRRRTTA
Best auROC (human)0.996
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words500
TF familyPaired-related HD factors {3.1.3}
TF subfamilyDUX {3.1.3.7}
HGNCHGNC:50800
EntrezGeneGeneID:100288687
(SSTAR profile)
UniProt IDDUX4_HUMAN
UniProt ACQ9UBX2
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.850515
0.0005 4.2424550000000005
0.0001 7.15412
GTEx tissue expression atlas DUX4 expression
ReMap ChIP-seq dataset list DUX4 datasets
Motifs in JASPAR
MA0468.1 (DUX4; Homo sapiens)
PCM
ACGT
0113.00.01.0486.0
026.00.0494.00.0
03500.00.00.00.0
041.00.01.0498.0
051.01.04.0494.0
06350.029.0120.01.0
07144.055.0300.01.0
08196.07.0253.044.0
092.01.00.0497.0
100.06.02.0492.0
11420.09.012.059.0
PWM
ACGT
01-2.163-4.4-3.9031.349
02-2.819-4.41.365-4.4
031.377-4.4-4.4-4.4
04-3.903-4.4-3.9031.373
05-3.903-3.903-3.1261.365
061.022-1.421-0.04-3.903
070.14-0.8050.868-3.903
080.445-2.6940.699-1.022
09-3.573-3.903-4.41.371
10-4.4-2.819-3.5731.361
111.203-2.484-2.234-0.737