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Model info
Transcription factorE2F1
(GeneCards)
ModelE2F1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnSGCGGGARvnvvnvn
Best auROC (human)0.924
Best auROC (mouse)0.947
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)21
Aligned words501
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3113
EntrezGeneGeneID:1869
(SSTAR profile)
UniProt IDE2F1_HUMAN
UniProt ACQ01094
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.53711
0.0005 8.31601
0.0001 11.94906
GTEx tissue expression atlas E2F1 expression
ReMap ChIP-seq dataset list E2F1 datasets
Motifs in JASPAR
MA0024.1 (E2F1; Homo sapiens)
MA0024.2 (E2F1; Homo sapiens)
MA0024.3 (E2F1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.015.080.01.013.017.071.06.026.067.078.03.04.06.098.01.0
022.02.051.02.02.014.087.02.017.017.0275.018.02.00.06.03.0
0312.03.01.07.00.031.00.02.026.0383.00.010.05.019.01.00.0
045.02.028.08.016.00.0407.013.00.00.01.01.01.02.015.01.0
051.00.020.01.00.00.03.01.03.011.0436.01.00.00.023.00.0
060.00.04.00.00.00.011.00.010.02.0470.00.00.00.03.00.0
0710.00.00.00.01.00.00.01.0469.00.07.012.00.00.00.00.0
08275.038.0161.06.00.00.00.00.06.00.01.00.06.00.07.00.0
09120.034.0106.027.08.012.05.013.068.037.043.021.01.00.02.03.0
1061.029.073.034.09.027.028.019.038.033.065.020.07.09.017.031.0
1123.023.055.014.016.013.043.026.039.050.074.020.019.023.030.032.0
1214.013.059.011.020.022.057.010.035.049.0105.013.02.023.039.028.0
1334.011.015.011.023.023.041.020.083.072.075.030.018.016.014.014.0
1466.019.062.011.023.018.055.026.066.023.046.010.07.012.041.015.0
1558.032.050.022.011.017.029.015.047.065.069.023.07.011.023.021.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.788-0.7210.932-3.126-0.86-0.5990.814-1.6-0.1810.7560.907-2.234-1.975-1.61.135-3.126
02-2.584-2.5840.485-2.584-2.584-0.7881.016-2.584-0.599-0.5992.164-0.543-2.584-4.4-1.6-2.234
03-0.938-2.234-3.126-1.454-4.4-0.008-4.4-2.584-0.1812.495-4.4-1.114-1.77-0.49-3.126-4.4
04-1.77-2.584-0.108-1.328-0.658-4.42.555-0.86-4.4-4.4-3.126-3.126-3.126-2.584-0.721-3.126
05-3.126-4.4-0.439-3.126-4.4-4.4-2.234-3.126-2.234-1.0222.624-3.126-4.4-4.4-0.302-4.4
06-4.4-4.4-1.975-4.4-4.4-4.4-1.022-4.4-1.114-2.5842.699-4.4-4.4-4.4-2.234-4.4
07-1.114-4.4-4.4-4.4-3.126-4.4-4.4-3.1262.697-4.4-1.454-0.938-4.4-4.4-4.4-4.4
082.1640.1931.629-1.6-4.4-4.4-4.4-4.4-1.6-4.4-3.126-4.4-1.6-4.4-1.454-4.4
091.3360.0831.213-0.144-1.328-0.938-1.77-0.860.7710.1670.316-0.392-3.126-4.4-2.584-2.234
100.663-0.0740.8410.083-1.215-0.144-0.108-0.490.1930.0540.726-0.439-1.454-1.215-0.599-0.008
11-0.302-0.3020.56-0.788-0.658-0.860.316-0.1810.2190.4650.855-0.439-0.49-0.302-0.040.023
12-0.788-0.860.63-1.022-0.439-0.3460.595-1.1140.1120.4451.203-0.86-2.584-0.3020.219-0.108
130.083-1.022-0.721-1.022-0.302-0.3020.269-0.4390.9690.8280.868-0.04-0.543-0.658-0.788-0.788
140.741-0.490.679-1.022-0.302-0.5430.56-0.1810.741-0.3020.383-1.114-1.454-0.9380.269-0.721
150.6130.0230.465-0.346-1.022-0.599-0.074-0.7210.4040.7260.785-0.302-1.454-1.022-0.302-0.392