We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F1
(GeneCards)
ModelE2F1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnSGCGGGARvnvvnvn
Best auROC (human)0.924
Best auROC (mouse)0.947
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)21
Aligned words501
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3113
EntrezGeneGeneID:1869
(SSTAR profile)
UniProt IDE2F1_HUMAN
UniProt ACQ01094
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.53711
0.0005 8.31601
0.0001 11.94906
GTEx tissue expression atlas E2F1 expression
ReMap ChIP-seq dataset list E2F1 datasets
Motifs in JASPAR
MA0024.1 (E2F1; Homo sapiens)
MA0024.2 (E2F1; Homo sapiens)
MA0024.3 (E2F1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.015.080.01.013.017.071.06.026.067.078.03.04.06.098.01.0
022.02.051.02.02.014.087.02.017.017.0275.018.02.00.06.03.0
0312.03.01.07.00.031.00.02.026.0383.00.010.05.019.01.00.0
045.02.028.08.016.00.0407.013.00.00.01.01.01.02.015.01.0
051.00.020.01.00.00.03.01.03.011.0436.01.00.00.023.00.0
060.00.04.00.00.00.011.00.010.02.0470.00.00.00.03.00.0
0710.00.00.00.01.00.00.01.0469.00.07.012.00.00.00.00.0
08275.038.0161.06.00.00.00.00.06.00.01.00.06.00.07.00.0
09120.034.0106.027.08.012.05.013.068.037.043.021.01.00.02.03.0
1061.029.073.034.09.027.028.019.038.033.065.020.07.09.017.031.0
1123.023.055.014.016.013.043.026.039.050.074.020.019.023.030.032.0
1214.013.059.011.020.022.057.010.035.049.0105.013.02.023.039.028.0
1334.011.015.011.023.023.041.020.083.072.075.030.018.016.014.014.0
1466.019.062.011.023.018.055.026.066.023.046.010.07.012.041.015.0
1558.032.050.022.011.017.029.015.047.065.069.023.07.011.023.021.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.788-0.7210.932-3.126-0.86-0.5990.814-1.6-0.1810.7560.907-2.234-1.975-1.61.135-3.126
02-2.584-2.5840.485-2.584-2.584-0.7881.016-2.584-0.599-0.5992.164-0.543-2.584-4.4-1.6-2.234
03-0.938-2.234-3.126-1.454-4.4-0.008-4.4-2.584-0.1812.495-4.4-1.114-1.77-0.49-3.126-4.4
04-1.77-2.584-0.108-1.328-0.658-4.42.555-0.86-4.4-4.4-3.126-3.126-3.126-2.584-0.721-3.126
05-3.126-4.4-0.439-3.126-4.4-4.4-2.234-3.126-2.234-1.0222.624-3.126-4.4-4.4-0.302-4.4
06-4.4-4.4-1.975-4.4-4.4-4.4-1.022-4.4-1.114-2.5842.699-4.4-4.4-4.4-2.234-4.4
07-1.114-4.4-4.4-4.4-3.126-4.4-4.4-3.1262.697-4.4-1.454-0.938-4.4-4.4-4.4-4.4
082.1640.1931.629-1.6-4.4-4.4-4.4-4.4-1.6-4.4-3.126-4.4-1.6-4.4-1.454-4.4
091.3360.0831.213-0.144-1.328-0.938-1.77-0.860.7710.1670.316-0.392-3.126-4.4-2.584-2.234
100.663-0.0740.8410.083-1.215-0.144-0.108-0.490.1930.0540.726-0.439-1.454-1.215-0.599-0.008
11-0.302-0.3020.56-0.788-0.658-0.860.316-0.1810.2190.4650.855-0.439-0.49-0.302-0.040.023
12-0.788-0.860.63-1.022-0.439-0.3460.595-1.1140.1120.4451.203-0.86-2.584-0.3020.219-0.108
130.083-1.022-0.721-1.022-0.302-0.3020.269-0.4390.9690.8280.868-0.04-0.543-0.658-0.788-0.788
140.741-0.490.679-1.022-0.302-0.5430.56-0.1810.741-0.3020.383-1.114-1.454-0.9380.269-0.721
150.6130.0230.465-0.346-1.022-0.599-0.074-0.7210.4040.7260.785-0.302-1.454-1.022-0.302-0.392