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Model info
Transcription factorE2f1
ModelE2F1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnddKGGCGGGRvnnvn
Best auROC (human)0.902
Best auROC (mouse)0.982
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)21
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
MGIMGI:101941
EntrezGeneGeneID:13555
(SSTAR profile)
UniProt IDE2F1_MOUSE
UniProt ACQ61501
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.485609999999999
0.0005 6.45191
0.0001 10.54481
GTEx tissue expression atlas E2f1 expression
Motifs in JASPAR
MA0024.1 (E2F1; Homo sapiens)
MA0024.2 (E2F1; Homo sapiens)
MA0024.3 (E2F1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0118.05.091.028.017.011.065.014.035.037.083.017.09.05.052.09.0
0226.07.043.03.010.016.019.013.091.037.0120.043.039.01.014.014.0
0324.01.099.042.09.00.040.012.037.010.0138.011.04.03.050.016.0
043.04.067.00.01.02.011.00.08.056.0262.01.00.01.078.02.0
051.01.010.00.00.00.063.00.02.07.0407.02.00.01.02.00.0
060.03.00.00.00.04.00.05.00.0452.03.027.00.01.00.01.0
070.00.00.00.014.01.0444.01.00.00.03.00.00.01.031.01.0
084.00.09.01.00.00.02.00.031.02.0435.010.00.00.02.00.0
090.00.035.00.00.00.02.00.013.04.0430.01.00.00.011.00.0
101.00.012.00.01.01.01.01.0245.014.0204.015.00.00.00.01.0
11140.053.038.016.05.06.01.03.076.0122.08.011.08.05.03.01.0
1299.048.072.010.018.066.057.045.016.010.019.05.06.011.09.05.0
1370.022.031.016.035.026.031.043.034.052.054.017.012.09.016.028.0
1454.027.056.014.015.015.060.019.041.010.067.014.021.023.042.018.0
1522.045.049.015.014.018.024.019.059.061.074.031.06.017.030.012.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.535-1.7621.069-0.1-0.591-1.0140.734-0.780.120.1750.977-0.591-1.207-1.7620.512-1.207
02-0.174-1.4470.324-2.226-1.106-0.65-0.482-0.8521.0690.1751.3440.3240.227-3.119-0.78-0.78
03-0.252-3.1191.1530.3-1.207-4.3930.252-0.930.175-1.1061.484-1.014-1.968-2.2260.473-0.65
04-2.226-1.9680.764-4.393-3.119-2.576-1.014-4.393-1.320.5862.123-3.119-4.393-3.1190.915-2.576
05-3.119-3.119-1.106-4.393-4.393-4.3930.703-4.393-2.576-1.4472.563-2.576-4.393-3.119-2.576-4.393
06-4.393-2.226-4.393-4.393-4.393-1.968-4.393-1.762-4.3932.668-2.226-0.136-4.393-3.119-4.393-3.119
07-4.393-4.393-4.393-4.393-0.78-3.1192.65-3.119-4.393-4.393-2.226-4.393-4.393-3.1190.0-3.119
08-1.968-4.393-1.207-3.119-4.393-4.393-2.576-4.3930.0-2.5762.63-1.106-4.393-4.393-2.576-4.393
09-4.393-4.3930.12-4.393-4.393-4.393-2.576-4.393-0.852-1.9682.618-3.119-4.393-4.393-1.014-4.393
10-3.119-4.393-0.93-4.393-3.119-3.119-3.119-3.1192.056-0.781.874-0.713-4.393-4.393-4.393-3.119
111.4980.5310.201-0.65-1.762-1.592-3.119-2.2260.8891.361-1.32-1.014-1.32-1.762-2.226-3.119
121.1530.4330.836-1.106-0.5350.7490.6030.369-0.65-1.106-0.482-1.762-1.592-1.014-1.207-1.762
130.808-0.3380.0-0.650.12-0.1740.00.3240.0910.5120.55-0.591-0.93-1.207-0.65-0.1
140.55-0.1360.586-0.78-0.713-0.7130.654-0.4820.277-1.1060.764-0.78-0.384-0.2940.3-0.535
15-0.3380.3690.453-0.713-0.78-0.535-0.252-0.4820.6380.6710.8630.0-1.592-0.591-0.032-0.93