We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2f1
ModelE2F1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnddKGGCGGGRvnnvn
Best auROC (human)0.902
Best auROC (mouse)0.982
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)21
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
MGIMGI:101941
EntrezGeneGeneID:13555
(SSTAR profile)
UniProt IDE2F1_MOUSE
UniProt ACQ61501
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.485609999999999
0.0005 6.45191
0.0001 10.54481
GTEx tissue expression atlas E2f1 expression
Motifs in JASPAR
MA0024.1 (E2F1; Homo sapiens)
MA0024.2 (E2F1; Homo sapiens)
MA0024.3 (E2F1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0118.05.091.028.017.011.065.014.035.037.083.017.09.05.052.09.0
0226.07.043.03.010.016.019.013.091.037.0120.043.039.01.014.014.0
0324.01.099.042.09.00.040.012.037.010.0138.011.04.03.050.016.0
043.04.067.00.01.02.011.00.08.056.0262.01.00.01.078.02.0
051.01.010.00.00.00.063.00.02.07.0407.02.00.01.02.00.0
060.03.00.00.00.04.00.05.00.0452.03.027.00.01.00.01.0
070.00.00.00.014.01.0444.01.00.00.03.00.00.01.031.01.0
084.00.09.01.00.00.02.00.031.02.0435.010.00.00.02.00.0
090.00.035.00.00.00.02.00.013.04.0430.01.00.00.011.00.0
101.00.012.00.01.01.01.01.0245.014.0204.015.00.00.00.01.0
11140.053.038.016.05.06.01.03.076.0122.08.011.08.05.03.01.0
1299.048.072.010.018.066.057.045.016.010.019.05.06.011.09.05.0
1370.022.031.016.035.026.031.043.034.052.054.017.012.09.016.028.0
1454.027.056.014.015.015.060.019.041.010.067.014.021.023.042.018.0
1522.045.049.015.014.018.024.019.059.061.074.031.06.017.030.012.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.535-1.7621.069-0.1-0.591-1.0140.734-0.780.120.1750.977-0.591-1.207-1.7620.512-1.207
02-0.174-1.4470.324-2.226-1.106-0.65-0.482-0.8521.0690.1751.3440.3240.227-3.119-0.78-0.78
03-0.252-3.1191.1530.3-1.207-4.3930.252-0.930.175-1.1061.484-1.014-1.968-2.2260.473-0.65
04-2.226-1.9680.764-4.393-3.119-2.576-1.014-4.393-1.320.5862.123-3.119-4.393-3.1190.915-2.576
05-3.119-3.119-1.106-4.393-4.393-4.3930.703-4.393-2.576-1.4472.563-2.576-4.393-3.119-2.576-4.393
06-4.393-2.226-4.393-4.393-4.393-1.968-4.393-1.762-4.3932.668-2.226-0.136-4.393-3.119-4.393-3.119
07-4.393-4.393-4.393-4.393-0.78-3.1192.65-3.119-4.393-4.393-2.226-4.393-4.393-3.1190.0-3.119
08-1.968-4.393-1.207-3.119-4.393-4.393-2.576-4.3930.0-2.5762.63-1.106-4.393-4.393-2.576-4.393
09-4.393-4.3930.12-4.393-4.393-4.393-2.576-4.393-0.852-1.9682.618-3.119-4.393-4.393-1.014-4.393
10-3.119-4.393-0.93-4.393-3.119-3.119-3.119-3.1192.056-0.781.874-0.713-4.393-4.393-4.393-3.119
111.4980.5310.201-0.65-1.762-1.592-3.119-2.2260.8891.361-1.32-1.014-1.32-1.762-2.226-3.119
121.1530.4330.836-1.106-0.5350.7490.6030.369-0.65-1.106-0.482-1.762-1.592-1.014-1.207-1.762
130.808-0.3380.0-0.650.12-0.1740.00.3240.0910.5120.55-0.591-0.93-1.207-0.65-0.1
140.55-0.1360.586-0.78-0.713-0.7130.654-0.4820.277-1.1060.764-0.78-0.384-0.2940.3-0.535
15-0.3380.3690.453-0.713-0.78-0.535-0.252-0.4820.6380.6710.8630.0-1.592-0.591-0.032-0.93