We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F2
(GeneCards)
ModelE2F2_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
B
Motif rank
0
ConsensusRGCGCGMAWC
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3114
EntrezGeneGeneID:1870
(SSTAR profile)
UniProt IDE2F2_HUMAN
UniProt ACQ14209
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.702885
0.0005 4.309794999999999
0.0001 5.565004999999999
GTEx tissue expression atlas E2F2 expression
ReMap ChIP-seq dataset list E2F2 datasets
Motifs in JASPAR
PCM
ACGT
011.2421.1215.4850.152
020.00.08.00.0
030.06.3031.6970.0
040.00.08.00.0
050.06.3031.0910.606
060.00.3037.6970.0
075.3331.5761.0910.0
087.030.970.00.0
095.3330.00.6062.061
100.3335.9090.3331.424
PWM
ACGT
01-0.358-0.4290.868-1.323
02-1.578-1.5781.218-1.578
03-1.5780.996-0.128-1.578
04-1.578-1.5781.218-1.578
05-1.5780.996-0.447-0.806
06-1.578-1.1191.182-1.578
070.843-0.184-0.447-1.578
081.097-0.526-1.578-1.578
090.843-1.578-0.8060.024
10-1.0830.937-1.083-0.259