Transcription factor | E2F3 (GeneCards) | ||||||||
Model | E2F3_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 17 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvvSGCGGGARvvvvvv | ||||||||
Best auROC (human) | 0.859 | ||||||||
Best auROC (mouse) | 0.993 | ||||||||
Peak sets in benchmark (human) | 3 | ||||||||
Peak sets in benchmark (mouse) | 22 | ||||||||
Aligned words | 501 | ||||||||
TF family | E2F-related factors {3.3.2} | ||||||||
TF subfamily | E2F {3.3.2.1} | ||||||||
HGNC | HGNC:3115 | ||||||||
EntrezGene | GeneID:1871 (SSTAR profile) | ||||||||
UniProt ID | E2F3_HUMAN | ||||||||
UniProt AC | O00716 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | E2F3 expression | ||||||||
ReMap ChIP-seq dataset list | E2F3 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 17.0 | 17.0 | 36.0 | 7.0 | 22.0 | 27.0 | 62.0 | 11.0 | 69.0 | 106.0 | 78.0 | 7.0 | 4.0 | 4.0 | 27.0 | 6.0 |
02 | 16.0 | 10.0 | 76.0 | 10.0 | 16.0 | 18.0 | 92.0 | 28.0 | 37.0 | 50.0 | 96.0 | 20.0 | 3.0 | 5.0 | 17.0 | 6.0 |
03 | 9.0 | 11.0 | 52.0 | 0.0 | 13.0 | 15.0 | 52.0 | 3.0 | 27.0 | 94.0 | 156.0 | 4.0 | 2.0 | 5.0 | 56.0 | 1.0 |
04 | 3.0 | 3.0 | 44.0 | 1.0 | 1.0 | 0.0 | 123.0 | 1.0 | 1.0 | 11.0 | 302.0 | 2.0 | 0.0 | 0.0 | 7.0 | 1.0 |
05 | 2.0 | 3.0 | 0.0 | 0.0 | 1.0 | 10.0 | 0.0 | 3.0 | 28.0 | 431.0 | 2.0 | 15.0 | 1.0 | 1.0 | 0.0 | 3.0 |
06 | 0.0 | 0.0 | 32.0 | 0.0 | 16.0 | 1.0 | 428.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 2.0 | 0.0 | 19.0 | 0.0 |
07 | 0.0 | 0.0 | 18.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 2.0 | 476.0 | 2.0 | 0.0 | 0.0 | 0.0 | 0.0 |
08 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 16.0 | 2.0 | 475.0 | 2.0 | 0.0 | 0.0 | 2.0 | 0.0 |
09 | 16.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 447.0 | 13.0 | 10.0 | 10.0 | 2.0 | 0.0 | 0.0 | 0.0 |
10 | 177.0 | 44.0 | 239.0 | 7.0 | 11.0 | 0.0 | 1.0 | 1.0 | 5.0 | 2.0 | 3.0 | 0.0 | 2.0 | 0.0 | 5.0 | 3.0 |
11 | 42.0 | 45.0 | 95.0 | 13.0 | 10.0 | 10.0 | 17.0 | 9.0 | 41.0 | 77.0 | 117.0 | 13.0 | 5.0 | 1.0 | 4.0 | 1.0 |
12 | 15.0 | 30.0 | 47.0 | 6.0 | 14.0 | 33.0 | 64.0 | 22.0 | 46.0 | 84.0 | 90.0 | 13.0 | 2.0 | 11.0 | 12.0 | 11.0 |
13 | 20.0 | 10.0 | 42.0 | 5.0 | 24.0 | 33.0 | 83.0 | 18.0 | 70.0 | 56.0 | 79.0 | 8.0 | 9.0 | 7.0 | 28.0 | 8.0 |
14 | 22.0 | 18.0 | 73.0 | 10.0 | 9.0 | 18.0 | 66.0 | 13.0 | 29.0 | 55.0 | 135.0 | 13.0 | 3.0 | 9.0 | 20.0 | 7.0 |
15 | 12.0 | 8.0 | 38.0 | 5.0 | 17.0 | 20.0 | 61.0 | 2.0 | 65.0 | 105.0 | 115.0 | 9.0 | 3.0 | 12.0 | 22.0 | 6.0 |
16 | 12.0 | 19.0 | 63.0 | 3.0 | 17.0 | 26.0 | 86.0 | 16.0 | 36.0 | 87.0 | 101.0 | 12.0 | 1.0 | 4.0 | 11.0 | 6.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | -0.599 | -0.599 | 0.14 | -1.454 | -0.346 | -0.144 | 0.679 | -1.022 | 0.785 | 1.213 | 0.907 | -1.454 | -1.975 | -1.975 | -0.144 | -1.6 |
02 | -0.658 | -1.114 | 0.881 | -1.114 | -0.658 | -0.543 | 1.072 | -0.108 | 0.167 | 0.465 | 1.114 | -0.439 | -2.234 | -1.77 | -0.599 | -1.6 |
03 | -1.215 | -1.022 | 0.504 | -4.4 | -0.86 | -0.721 | 0.504 | -2.234 | -0.144 | 1.093 | 1.598 | -1.975 | -2.584 | -1.77 | 0.578 | -3.126 |
04 | -2.234 | -2.234 | 0.339 | -3.126 | -3.126 | -4.4 | 1.361 | -3.126 | -3.126 | -1.022 | 2.257 | -2.584 | -4.4 | -4.4 | -1.454 | -3.126 |
05 | -2.584 | -2.234 | -4.4 | -4.4 | -3.126 | -1.114 | -4.4 | -2.234 | -0.108 | 2.613 | -2.584 | -0.721 | -3.126 | -3.126 | -4.4 | -2.234 |
06 | -4.4 | -4.4 | 0.023 | -4.4 | -0.658 | -3.126 | 2.606 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -2.584 | -4.4 | -0.49 | -4.4 |
07 | -4.4 | -4.4 | -0.543 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -3.126 | -2.584 | 2.712 | -2.584 | -4.4 | -4.4 | -4.4 | -4.4 |
08 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -0.658 | -2.584 | 2.71 | -2.584 | -4.4 | -4.4 | -2.584 | -4.4 |
09 | -0.658 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 | -4.4 | 2.649 | -0.86 | -1.114 | -1.114 | -2.584 | -4.4 | -4.4 | -4.4 |
10 | 1.724 | 0.339 | 2.024 | -1.454 | -1.022 | -4.4 | -3.126 | -3.126 | -1.77 | -2.584 | -2.234 | -4.4 | -2.584 | -4.4 | -1.77 | -2.234 |
11 | 0.293 | 0.361 | 1.104 | -0.86 | -1.114 | -1.114 | -0.599 | -1.215 | 0.269 | 0.894 | 1.311 | -0.86 | -1.77 | -3.126 | -1.975 | -3.126 |
12 | -0.721 | -0.04 | 0.404 | -1.6 | -0.788 | 0.054 | 0.711 | -0.346 | 0.383 | 0.981 | 1.05 | -0.86 | -2.584 | -1.022 | -0.938 | -1.022 |
13 | -0.439 | -1.114 | 0.293 | -1.77 | -0.26 | 0.054 | 0.969 | -0.543 | 0.8 | 0.578 | 0.92 | -1.328 | -1.215 | -1.454 | -0.108 | -1.328 |
14 | -0.346 | -0.543 | 0.841 | -1.114 | -1.215 | -0.543 | 0.741 | -0.86 | -0.074 | 0.56 | 1.454 | -0.86 | -2.234 | -1.215 | -0.439 | -1.454 |
15 | -0.938 | -1.328 | 0.193 | -1.77 | -0.599 | -0.439 | 0.663 | -2.584 | 0.726 | 1.203 | 1.294 | -1.215 | -2.234 | -0.938 | -0.346 | -1.6 |
16 | -0.938 | -0.49 | 0.695 | -2.234 | -0.599 | -0.181 | 1.004 | -0.658 | 0.14 | 1.016 | 1.165 | -0.938 | -3.126 | -1.975 | -1.022 | -1.6 |