We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F3
(GeneCards)
ModelE2F3_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusddRGMKGGARv
Best auROC (human)0.888
Best auROC (mouse)0.916
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)22
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3115
EntrezGeneGeneID:1871
(SSTAR profile)
UniProt IDE2F3_HUMAN
UniProt ACO00716
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.837059999999999
0.0005 5.6027000000000005
0.0001 7.190025
GTEx tissue expression atlas E2F3 expression
ReMap ChIP-seq dataset list E2F3 datasets
Motifs in JASPAR
MA0469.1 (E2F3; Mus musculus)
MA0469.2 (E2F3; Homo sapiens)
PCM
ACGT
01188.070.0104.0138.0
02131.023.0205.0141.0
0363.062.0338.037.0
0417.03.0478.02.0
0562.0385.010.043.0
0676.02.0342.080.0
0748.010.0434.08.0
089.05.0479.07.0
09417.019.059.05.0
10356.031.0100.013.0
11267.055.0125.053.0
PWM
ACGT
010.404-0.57-0.1810.098
020.046-1.640.490.119
03-0.673-0.6890.987-1.189
04-1.92-3.3251.332-3.573
05-0.6891.117-2.394-1.044
06-0.49-3.5730.999-0.439
07-0.938-2.3941.236-2.584
08-2.484-2.9611.334-2.694
091.196-1.818-0.737-2.961
101.039-1.358-0.22-2.163
110.752-0.8050.0-0.841