Model info
| Transcription factor | E2F3 (GeneCards) | ||||||||
| Model | E2F3_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ddRGMKGGARv | ||||||||
| Best auROC (human) | 0.888 | ||||||||
| Best auROC (mouse) | 0.916 | ||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | 22 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| HGNC | HGNC:3115 | ||||||||
| EntrezGene | GeneID:1871 (SSTAR profile) | ||||||||
| UniProt ID | E2F3_HUMAN | ||||||||
| UniProt AC | O00716 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2F3 expression | ||||||||
| ReMap ChIP-seq dataset list | E2F3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 188.0 | 70.0 | 104.0 | 138.0 |
| 02 | 131.0 | 23.0 | 205.0 | 141.0 |
| 03 | 63.0 | 62.0 | 338.0 | 37.0 |
| 04 | 17.0 | 3.0 | 478.0 | 2.0 |
| 05 | 62.0 | 385.0 | 10.0 | 43.0 |
| 06 | 76.0 | 2.0 | 342.0 | 80.0 |
| 07 | 48.0 | 10.0 | 434.0 | 8.0 |
| 08 | 9.0 | 5.0 | 479.0 | 7.0 |
| 09 | 417.0 | 19.0 | 59.0 | 5.0 |
| 10 | 356.0 | 31.0 | 100.0 | 13.0 |
| 11 | 267.0 | 55.0 | 125.0 | 53.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.404 | -0.57 | -0.181 | 0.098 |
| 02 | 0.046 | -1.64 | 0.49 | 0.119 |
| 03 | -0.673 | -0.689 | 0.987 | -1.189 |
| 04 | -1.92 | -3.325 | 1.332 | -3.573 |
| 05 | -0.689 | 1.117 | -2.394 | -1.044 |
| 06 | -0.49 | -3.573 | 0.999 | -0.439 |
| 07 | -0.938 | -2.394 | 1.236 | -2.584 |
| 08 | -2.484 | -2.961 | 1.334 | -2.694 |
| 09 | 1.196 | -1.818 | -0.737 | -2.961 |
| 10 | 1.039 | -1.358 | -0.22 | -2.163 |
| 11 | 0.752 | -0.805 | 0.0 | -0.841 |