Transcription factor | E2f3 | ||||||||
Model | E2F3_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 10 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | dSGCGGGARv | ||||||||
Best auROC (human) | 0.813 | ||||||||
Best auROC (mouse) | 0.971 | ||||||||
Peak sets in benchmark (human) | 3 | ||||||||
Peak sets in benchmark (mouse) | 22 | ||||||||
Aligned words | 498 | ||||||||
TF family | E2F-related factors {3.3.2} | ||||||||
TF subfamily | E2F {3.3.2.1} | ||||||||
MGI | MGI:1096340 | ||||||||
EntrezGene | GeneID:13557 (SSTAR profile) | ||||||||
UniProt ID | E2F3_MOUSE | ||||||||
UniProt AC | O35261 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | E2f3 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 93.0 | 56.0 | 284.0 | 65.0 |
02 | 61.0 | 128.0 | 308.0 | 1.0 |
03 | 3.0 | 12.0 | 475.0 | 8.0 |
04 | 37.0 | 457.0 | 0.0 | 4.0 |
05 | 10.0 | 15.0 | 471.0 | 2.0 |
06 | 2.0 | 13.0 | 479.0 | 4.0 |
07 | 33.0 | 5.0 | 459.0 | 1.0 |
08 | 490.0 | 2.0 | 4.0 | 2.0 |
09 | 220.0 | 42.0 | 235.0 | 1.0 |
10 | 104.0 | 131.0 | 235.0 | 28.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.288 | -0.784 | 0.818 | -0.639 |
02 | -0.701 | 0.027 | 0.898 | -3.9 |
03 | -3.321 | -2.23 | 1.33 | -2.58 |
04 | -1.185 | 1.291 | -4.397 | -3.122 |
05 | -2.39 | -2.03 | 1.321 | -3.569 |
06 | -3.569 | -2.159 | 1.338 | -3.122 |
07 | -1.294 | -2.957 | 1.296 | -3.9 |
08 | 1.361 | -3.569 | -3.122 | -3.569 |
09 | 0.564 | -1.063 | 0.629 | -3.9 |
10 | -0.177 | 0.05 | 0.629 | -1.451 |