We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F4
(GeneCards)
ModelE2F4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusndvvSndSGCGSRRdn
Best auROC (human)0.963
Best auROC (mouse)0.989
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)37
Aligned words458
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3118
EntrezGeneGeneID:1874
(SSTAR profile)
UniProt IDE2F4_HUMAN
UniProt ACQ16254
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.4775100000000005
0.0005 6.11546
0.0001 9.76431
GTEx tissue expression atlas E2F4 expression
ReMap ChIP-seq dataset list E2F4 datasets
Motifs in JASPAR
MA0470.1 (E2F4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0140.013.031.010.031.017.043.027.033.021.078.035.012.07.039.016.0
0255.018.039.04.022.011.018.07.070.029.075.017.017.015.048.08.0
0355.047.050.012.011.020.021.021.033.092.038.017.06.012.017.01.0
048.014.067.016.04.036.0110.021.08.058.054.06.02.011.027.011.0
0510.04.07.01.038.018.039.024.051.0133.046.028.019.06.014.015.0
0625.012.050.031.062.018.061.020.031.016.044.015.015.010.020.023.0
079.013.081.030.011.05.035.05.012.063.084.016.01.07.078.03.0
083.02.028.00.03.05.080.00.05.015.0258.00.00.04.050.00.0
090.011.00.00.00.025.00.01.02.0407.00.07.00.00.00.00.0
100.00.02.00.02.04.0432.05.00.00.00.00.00.01.07.00.0
111.00.01.00.00.03.01.01.012.0186.0234.09.00.00.05.00.0
122.00.011.00.043.032.0110.04.029.022.0185.05.04.01.04.01.0
1336.04.035.03.040.01.012.02.0189.030.078.013.03.01.05.01.0
14139.022.092.015.014.06.08.08.045.022.041.022.02.02.08.07.0
1579.037.063.021.06.018.016.012.045.054.031.019.03.03.028.018.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.342-0.7630.09-1.0170.09-0.5010.413-0.0470.151-0.2941.0050.209-0.84-1.3580.317-0.561
020.658-0.4450.317-1.879-0.248-0.925-0.445-1.3580.8970.0240.966-0.501-0.501-0.6240.522-1.231
030.6580.5020.563-0.84-0.925-0.342-0.294-0.2940.1511.1690.291-0.501-1.503-0.84-0.501-3.033
04-1.231-0.6910.854-0.561-1.8790.2371.347-0.294-1.2310.710.639-1.503-2.489-0.925-0.047-0.925
05-1.017-1.879-1.358-3.0330.291-0.4450.317-0.1630.5831.5370.48-0.011-0.392-1.503-0.691-0.624
06-0.123-0.840.5630.090.777-0.4450.76-0.3420.09-0.5610.436-0.624-0.624-1.017-0.342-0.205
07-1.118-0.7631.0420.057-0.925-1.6740.209-1.674-0.840.7921.079-0.561-3.033-1.3581.005-2.138
08-2.138-2.489-0.011-4.318-2.138-1.6741.03-4.318-1.674-0.6242.198-4.318-4.318-1.8790.563-4.318
09-4.318-0.925-4.318-4.318-4.318-0.123-4.318-3.033-2.4892.653-4.318-1.358-4.318-4.318-4.318-4.318
10-4.318-4.318-2.489-4.318-2.489-1.8792.713-1.674-4.318-4.318-4.318-4.318-4.318-3.033-1.358-4.318
11-3.033-4.318-3.033-4.318-4.318-2.138-3.033-3.033-0.841.8712.1-1.118-4.318-4.318-1.674-4.318
12-2.489-4.318-0.925-4.3180.4130.1211.347-1.8790.024-0.2481.866-1.674-1.879-3.033-1.879-3.033
130.237-1.8790.209-2.1380.342-3.033-0.84-2.4891.8870.0571.005-0.763-2.138-3.033-1.674-3.033
141.581-0.2481.169-0.624-0.691-1.503-1.231-1.2310.458-0.2480.366-0.248-2.489-2.489-1.231-1.358
151.0180.2640.792-0.294-1.503-0.445-0.561-0.840.4580.6390.09-0.392-2.138-2.138-0.011-0.445