We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F4
(GeneCards)
ModelE2F4_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusvddSGCGGGRvvd
Best auROC (human)0.956
Best auROC (mouse)0.977
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)37
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3118
EntrezGeneGeneID:1874
(SSTAR profile)
UniProt IDE2F4_HUMAN
UniProt ACQ16254
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.82606
0.0005 3.7737099999999995
0.0001 5.65981
GTEx tissue expression atlas E2F4 expression
ReMap ChIP-seq dataset list E2F4 datasets
Motifs in JASPAR
MA0470.1 (E2F4; Homo sapiens)
PCM
ACGT
0173.0129.0253.045.0
02139.048.0231.082.0
03122.050.0263.065.0
0450.094.0348.08.0
052.018.0479.01.0
066.0487.00.07.0
0718.01.0473.08.0
082.019.0475.04.0
0945.07.0447.01.0
10358.011.0125.06.0
11268.0100.0111.021.0
12191.094.0141.074.0
13127.057.0153.0163.0
PWM
ACGT
01-0.5290.0310.699-1.0
020.105-0.9380.608-0.415
03-0.024-0.8980.737-0.643
04-0.898-0.2811.016-2.584
05-3.573-1.8681.334-3.903
06-2.8191.351-4.4-2.694
07-1.868-3.9031.322-2.584
08-3.573-1.8181.326-3.126
09-1.0-2.6941.265-3.903
101.044-2.3110.0-2.819
110.756-0.22-0.117-1.725
120.42-0.2810.119-0.516
130.016-0.7710.20.263