Model info
| Transcription factor | E2F4 (GeneCards) | ||||||||
| Model | E2F4_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vddSGCGGGRvvd | ||||||||
| Best auROC (human) | 0.956 | ||||||||
| Best auROC (mouse) | 0.977 | ||||||||
| Peak sets in benchmark (human) | 15 | ||||||||
| Peak sets in benchmark (mouse) | 37 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| HGNC | HGNC:3118 | ||||||||
| EntrezGene | GeneID:1874 (SSTAR profile) | ||||||||
| UniProt ID | E2F4_HUMAN | ||||||||
| UniProt AC | Q16254 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2F4 expression | ||||||||
| ReMap ChIP-seq dataset list | E2F4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 73.0 | 129.0 | 253.0 | 45.0 |
| 02 | 139.0 | 48.0 | 231.0 | 82.0 |
| 03 | 122.0 | 50.0 | 263.0 | 65.0 |
| 04 | 50.0 | 94.0 | 348.0 | 8.0 |
| 05 | 2.0 | 18.0 | 479.0 | 1.0 |
| 06 | 6.0 | 487.0 | 0.0 | 7.0 |
| 07 | 18.0 | 1.0 | 473.0 | 8.0 |
| 08 | 2.0 | 19.0 | 475.0 | 4.0 |
| 09 | 45.0 | 7.0 | 447.0 | 1.0 |
| 10 | 358.0 | 11.0 | 125.0 | 6.0 |
| 11 | 268.0 | 100.0 | 111.0 | 21.0 |
| 12 | 191.0 | 94.0 | 141.0 | 74.0 |
| 13 | 127.0 | 57.0 | 153.0 | 163.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.529 | 0.031 | 0.699 | -1.0 |
| 02 | 0.105 | -0.938 | 0.608 | -0.415 |
| 03 | -0.024 | -0.898 | 0.737 | -0.643 |
| 04 | -0.898 | -0.281 | 1.016 | -2.584 |
| 05 | -3.573 | -1.868 | 1.334 | -3.903 |
| 06 | -2.819 | 1.351 | -4.4 | -2.694 |
| 07 | -1.868 | -3.903 | 1.322 | -2.584 |
| 08 | -3.573 | -1.818 | 1.326 | -3.126 |
| 09 | -1.0 | -2.694 | 1.265 | -3.903 |
| 10 | 1.044 | -2.311 | 0.0 | -2.819 |
| 11 | 0.756 | -0.22 | -0.117 | -1.725 |
| 12 | 0.42 | -0.281 | 0.119 | -0.516 |
| 13 | 0.016 | -0.771 | 0.2 | 0.263 |