Transcription factor | E2F4 (GeneCards) | ||||||||
Model | E2F4_HUMAN.H11MO.1.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Motif rank | 1 | ||||||||
Consensus | SGCGGGRRddbbnd | ||||||||
Best auROC (human) | 0.924 | ||||||||
Best auROC (mouse) | 0.97 | ||||||||
Peak sets in benchmark (human) | 15 | ||||||||
Peak sets in benchmark (mouse) | 37 | ||||||||
Aligned words | 500 | ||||||||
TF family | E2F-related factors {3.3.2} | ||||||||
TF subfamily | E2F {3.3.2.1} | ||||||||
HGNC | HGNC:3118 | ||||||||
EntrezGene | GeneID:1874 (SSTAR profile) | ||||||||
UniProt ID | E2F4_HUMAN | ||||||||
UniProt AC | Q16254 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | E2F4 expression | ||||||||
ReMap ChIP-seq dataset list | E2F4 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 53.0 | 112.0 | 324.0 | 11.0 |
02 | 6.0 | 43.0 | 451.0 | 0.0 |
03 | 21.0 | 466.0 | 4.0 | 9.0 |
04 | 10.0 | 1.0 | 482.0 | 7.0 |
05 | 9.0 | 123.0 | 366.0 | 2.0 |
06 | 16.0 | 37.0 | 436.0 | 11.0 |
07 | 375.0 | 49.0 | 68.0 | 8.0 |
08 | 359.0 | 31.0 | 86.0 | 24.0 |
09 | 197.0 | 66.0 | 128.0 | 109.0 |
10 | 112.0 | 61.0 | 100.0 | 227.0 |
11 | 73.0 | 102.0 | 92.0 | 233.0 |
12 | 65.0 | 161.0 | 101.0 | 173.0 |
13 | 157.0 | 88.0 | 166.0 | 89.0 |
14 | 236.0 | 50.0 | 158.0 | 56.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.841 | -0.108 | 0.945 | -2.311 |
02 | -2.819 | -1.044 | 1.274 | -4.4 |
03 | -1.725 | 1.307 | -3.126 | -2.484 |
04 | -2.394 | -3.903 | 1.34 | -2.694 |
05 | -2.484 | -0.016 | 1.066 | -3.573 |
06 | -1.975 | -1.189 | 1.241 | -2.311 |
07 | 1.09 | -0.918 | -0.599 | -2.584 |
08 | 1.047 | -1.358 | -0.368 | -1.6 |
09 | 0.45 | -0.628 | 0.023 | -0.135 |
10 | -0.108 | -0.705 | -0.22 | 0.591 |
11 | -0.529 | -0.201 | -0.302 | 0.617 |
12 | -0.643 | 0.25 | -0.21 | 0.322 |
13 | 0.225 | -0.346 | 0.281 | -0.335 |
14 | 0.63 | -0.898 | 0.232 | -0.788 |